Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100362026|gb|BY947746.1|BY947746EST: CATTCAACCCTGCAAAGTCGAGGCTTGCTCTTGAAGAGAAAAACATCAAG TATGTTGAAACGAAGATCGACCTCTTTAATGGTCAGTCTCTGGAGCCATGG
genomic: CATTCAACCCTGCAAAGTCGAGGCTTGCTCTTGAAGAGAAAAACATCAAGgtgagaccgc ... tttgttgtagTATGTTGAAACGAAGATCGACCTCTTTAATGGTCAGTCTCTGGAGCCATGG
EST:
gi|162193122|gb|FC371988.1|FC371988EST: CATTCAACCCTGCAAAGTCGAGGCTTGCTCTTGAAGAGAAAAACATCAAG TATGTTGAAACGAAGATCGACCTCTTTAATGGTCAGTCTCTGGAGCCATGG
genomic: CATTCAACCCTGCAAAGTCGAGGCTTGCTCTTGAAGAGAAAAACATCAAGgtgagaccgc ... tttgttgtagTATGTTGAAACGAAGATCGACCTCTTTAATGGTCAGTCTCTGGAGCCATGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTTCTGATGCATCACAAGGTTTAGCGATCTTCTACAACTACGCCCTTGCATTCAACCCTGCAAAGTCGAGGCTTGCTCTTGAAGAGAAAAACATCAAGgtgagaccgcttcctcgcttatcacatgccattgctattgagatcacgcatcacaatacccaccatactcgtggaattcgtatgtttacacaagctgttcgttttgttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA