Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|67720156|gb|BJ970415.1|BJ970415EST: CACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTG GTTTCGGACGCATGGTAATGAATTATGGGAGTTCGATGAAAACGGTCTCAT
genomic: CACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTGgtaagaactc ... ttcctggtagGTTTCGGACGCATGGTAATGAATTATGGGAGTTCGATGAAAACGGTCTCAT
EST:
gi|67721696|gb|BJ971955.1|BJ971955EST: CACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTG GGTTCGGACGCATGGTAATGAATTATGGGAGTTCGATGAAAACGGTCTCAT
genomic: CACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTGgtaagaactc ... ttcctggtagGTTTCGGACGCATGGTAATGAATTATGGGAGTTCGATGAAAACGGTCTCAT
EST:
gi|67701669|gb|BJ961902.1|BJ961902EST: CACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTG GTTTCGGACGCATGGTAATGAATTATGGGAGTT
genomic: CACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTGgtaagaactc ... ttcctggtagGTTTCGGACGCATGGTAATGAATTATGGGAGTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGGAGCTGGACTACCGACTGATGAAGGAGCTCTGGGCGTACACCGACAACCACATTGCGGTGCGATTTGAGTACGAGTGGCACAACGAGGCTGGAGAGTGgtaagaactcagttgattgcaatctacctctgcgcagtctgttggaaaagtttatcctgcaattatcagtaaccagattattggctgggttggtgaattgcttctttttggccattgttttcctggtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA