1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CATGACTAAATGCATCTACTGCGGCTTTTGCCAAGAAGCTTGCCCTGTGGACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttcacgaagaacatgtggtggttatggtccggtattccgtagatagctcccactattatctacatgttaataggggcatcattttctgatattgccgtttaattaatcttcgttttatttttgtttttttccctcgaacag
species | Physcomitrella patens |
transcript | PP1S83_83V6.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAG GAATTGTTGTATGACAAGGAGAAGCTTCTTGAAAACGGTGACCGCTGEST: gi|208391815|gb|DC937991.1|DC937991
genomic: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttca ... cctcgaacagGAATTGTTGTATGACAAGGAGAAGCTTCTTGAAAACGGTGACCGCTG
EST: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAG GAATTGTTGTATGAEST: gi|208356711|gb|DC902543.1|DC902543
genomic: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttca ... cctcgaacagGAATTGTTGTATGA
EST: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAG GAATTGTTGTATGEST: gi|67719791|gb|BJ970050.1|BJ970050
genomic: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttca ... cctcgaacagGAATTGTTGTATG
EST: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAG GAATNGTTGTATGACAAGGAGAAGCTTCTTGAEST: gi|208389974|gb|DC938029.1|DC938029
genomic: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttca ... cctcgaacagGAATTGTTGTATGACAAGGAGAAGCTTCTTGA
EST: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAAACTCATGAG GAATTGTTGTATGAEST: gi|100407453|gb|BY991709.1|BY991709
genomic: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttca ... cctcgaacagGAATTGTTGTATGA
EST: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAG GAATTGTTGTATGACAAGGAGAAGCTTCTTGAAAACGGTGACCGCTGGGAA
genomic: ACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttca ... cctcgaacagGAATTGTTGTATGACAAGGAGAAGCTTCTTGAAAACGGTGACCGCTGGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGACTAAATGCATCTACTGCGGCTTTTGCCAAGAAGCTTGCCCTGTGGACGCTATTGTGGAAGGTCCTAACTTTGAGTTCACCACGGAGACTCATGAGgtgagcttcacgaagaacatgtggtggttatggtccggtattccgtagatagctcccactattatctacatgttaataggggcatcattttctgatattgccgtttaattaatcttcgttttatttttgtttttttccctcgaacag
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