1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacaaactctaatctctttcttgttgtatcattgtcctgctcacgtttctgtatcaattattgtccaaatacttctccaatttgtgcgtaatagagttgtttaaagttgaaacgtttgatgactctatgtcctgaacatgttatccactcggacgtcatgcagTTGCTGCGAATAGAGGAGGAGCTTGGCCGCGTTCGATACGCAGGAGAAAGTTTCCGACAACCTCTGTAGACGAGGTGTTATAAATTTTAGTACTTTTGAA
species | Physcomitrella patens |
transcript | PP1S83_55V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TTAAAACTGGAGCTCCATGTCGGAGTGAACGACTGTCCAAGTATAATCAG TTGCTGCGAATAGAGGAGGAGCTTGGCCGCGTTCGATACGCAGGAGAAAGTEST: gi|67723958|gb|BJ974217.1|BJ974217
genomic: TTAAAACTGGAGCTCCATGTCGGAGTGAACGACTGTCCAAGTATAATCAGgtacaaactc ... cgtcatgcagTTGCTGCGAATAGAGGAGGAGCTTGGCCGCGTTCGATACGCAGGAGAAAGT
EST: TTAAAACTGGAGCTCCATGTCGGAGTGAACGACTGTCCAAGTATAATCAG TTGCTGCGAATAGAGGAGGAGCTTGGCCGCGTTCGATACGCAGGAGAAAGT
genomic: TTAAAACTGGAGCTCCATGTCGGAGTGAACGACTGTCCAAGTATAATCAGgtacaaactc ... cgtcatgcagTTGCTGCGAATAGAGGAGGAGCTTGGCCGCGTTCGATACGCAGGAGAAAGT
gaaacgtttgatgactctatgtcctgaacatgttatccactcggacgtcatgcagTTGCTGCGAATAGAGGAGGAGCTTGGCCGCGTTCGATACGCAGGAGAAAGTTTCCGACAACCTCTGTAGACGAGGTGTTATAAATTTTAGTACTTTTGAA
gtttgat putative branch site (score: 2)
atgttat TA-rich tract