1 5' 3' | 2 5' 3' |
...gaagggatccctgcgcgaagggtttcttcctatctctttacatatacgtatgcgaacttcgtgtgcatcacggacgtcatttattgacatcctctgtcagATATTTCTTGTAGGAAGCCGCTTTTCATATAAGTCATCATGGCGAATGAGGGTTTCAAGTTGAGTAAGGGAAGTAGCAGTCCTGTCTCTACAGGGGCTTT
species | Physcomitrella patens |
transcript | PP1S83_49V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTTATAGGGATCGTGGTTGTATTTTTCTCTGCGATAGCGGTTTTACTCTG ATATTTCTTGTAGGAAGCCGCTTTTCATATAAGTCATCATGGCGAATGAGGEST: gi|67699202|gb|BJ959435.1|BJ959435
genomic: CTTATAGGGATCGT-GTTGTATTTTTCTCTGCGATAGCGGTTTTACTCTGgtgagtttat ... cctctgtcagATATTTCTTGTAGGAAGCCGCTTTTCATATAAGTCATCATGGCGAATGAGG
EST: TCTTATAGGGATCGTGTTGTATTTTTCTCTGCGATAGCGGTTTTACTCTG ATATTTCTTGTAGGAAGCCGCTTTTCATATAAGTCATCATGGCGAATGAGG
genomic: TCTTATAGGGATCGTGTTGTATTTTTCTCTGCGATAGCGGTTTTACTCTGgtgagtttat ... cctctgtcagATATTTCTTGTAGGAAGCCGCTTTTCATATAAGTCATCATGGCGAATGAGG
acgtatgcgaacttcgtgtgcatcacggacgtcatttattgacatcctctgtcagATATTTCTTGTAGGAAGCCGCTTTTCATATAAGTCATCATGGCGAATGAGGGTTTCAAGTTGAGTAAGGGAAGTAGCAGTCCTGTCTCTACAGGGGCTTT
tattgac putative branch site (score: 2)
tcctctgtc CT-rich tract
tcatttatt TA-rich tract