1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ttcacgtccctgtttattaatcggtggaatgatgttaactctttcctgatgagtatttggttctcgttattctgattgttcttccgtcccttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTCTTCAAGCATTTCAAGCAG
species | Physcomitrella patens |
transcript | PP1S83_28V6.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAG ATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTCEST: gi|18338935|gb|BJ170961.1|BJ170961
genomic: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAGgtaaagtttc ... ttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTC
EST: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAG ATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTCEST: gi|18333942|gb|BJ165958.1|BJ165958
genomic: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAGgtaaagtttc ... ttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTC
EST: GGCCACTACGAAGAATGCGGCAAGGTTCACAAG ATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTCEST: gi|162173421|gb|FC349800.1|FC349800
genomic: GGCCACTACGAAGAATGCGGCAAGGTTCACAAGgtaaagtttc ... ttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTC
EST: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAG ATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTCEST: gi|37843731|gb|BJ601739.1|BJ601739
genomic: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAGgtaaagtttc ... ttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTC
EST: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAG ATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTC
genomic: CTAGCCTACCGGTTGTGGGCCACTACGAAGAATGCGGCAAGGTTCACAAGgtaaagtttc ... ttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTC
ctgatgagtatttggttctcgttattctgattgttcttccgtcccttttccccagATTGATGCAACCAAAACCCCAAGTGAAGTGTTTGAATCGATTAAACCACTCTTCAAGCATTTCAAGCAG
ttctgat putative branch site (score: 3)
ttctgattgttcttcc CT-rich tract
agtattt TA-rich tract