1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATTTCGAATAACGTGAATCCCCGTTTCCTTCTCAGGAATCAAAACACTCAAATCAGGACCAAAGCCGGCAAAGGGCTGTATCCGGATGGCAAGTTCAAAGgtacgttatactctccgctttggttggaaaaaaatgaagatgagagtcgagcactttttcgtggtgtagagtagctgtcattctctgtgggtgccgaaac...
species | Physcomitrella patens |
transcript | PP1S77_67V6.9 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AATCAGGACCAAAGCCGGCAAAGGGCTGTATCCGGATGGCAAGTTCAAAG GTGTTTGACACGGATGTCGGAGTTGAAAAATGGACAATGCCCGACAGCAAGEST: gi|162209829|gb|FC385971.1|FC385971
genomic: AATCAGGACCAAAGCCGGCAAAGGGCTGTATCCGGATGGCAAGTTCAAAGgtacgttata ... tatctagcagGTGTTTGACACGGATGTCGGAGTTGAAAAATGGACAATGCCCGACAGCAAG
EST: GATGGCAAGTTCAAAG GTGTTTGACTCGGATGTCGGAGTTGAAAAATGGACAATGCCCGACAGCAAG
genomic: GATGGCAAGTTCAAAGgtacgttata ... tatctagcagGTGTTTGACACGGATGTCGGAGTTGAAAAATGGACAATGCCCGACAGCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTCGAATAACGTGAATCCCCGTTTCCTTCTCAGGAATCAAAACACTCAAATCAGGACCAAAGCCGGCAAAGGGCTGTATCCGGATGGCAAGTTCAAAGgtacgttatactctccgctttggttggaaaaaaatgaagatgagagtcgagcactttttcgtggtgtagagtagctgtcattctctgtgggtgccgaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG