Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gcgcttggataggatggttggcatggcgtccagcttggatgatgttgtctgacattgagtgggtcgtgttttttttctttttctttgtggggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCCGGGACATCATCATGCGAGAGTTCCGTTCGGGGTCTTCCCGAGTTTTGAT

Basic information

species Physcomitrella patens
transcript PP1S77_16V6.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S77_16V6.1 (Physcomitrella patens), 3'ss of exon 4
lower sequence: EDP05185 (Chlamydomonas reinhardtii), 3'ss of exon 6
--------------------------------------------------------------------------------------------------gcg-cttggataggatggttggcatggcgtccagcttggatgatgttgt-ctgacattgagt--gggtcgtgttttttttctttttctttgtggg-------gatggaca--------gCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCCGGGACATCATCATGCGAGAGTTCCGTTCGGGGTCTTCCCGAGTTTTGAT
                                                                                                  ||| |  || ||   || |||      ||     || | |   ||||||  ||  |  || |   |  | || |     |    | |   |  ||       || |||||        |  || |||||||||||||| ||||| ||||| |||||||| |||||||| || ||  | |||||||| ||||                            
gtgtgggcggggacgcgcggggggggggggcgcctggggatgcgcgatggggaccaaccagcttcatttggcacagccggcaaacttctgagggcagggcggcccggctaacgtgtttgtgggaacggttgcctagcaccctgttgtgttgctaacgaattatgcccatgctgccgatgcaatccgcagGTGGACTGGCTGACGGACAAGATGCGCGAGCGCGACCACACCGTGTCCGCCACCCACGGCGACATGGACCAGAACACGCGCGATGTGATCATGCGCGAGT----------------------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67727453|gb|BJ977712.1|BJ977712
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208393939|gb|DC928719.1|DC928719
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162185203|gb|FC361713.1|FC361713
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162276618|gb|FC452196.1|FC452196
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67725859|gb|BJ976118.1|BJ976118
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724338|gb|BJ974597.1|BJ974597
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726487|gb|BJ976746.1|BJ976746
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726316|gb|BJ976575.1|BJ976575
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162245915|gb|FC420504.1|FC420504
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208368132|gb|DC947692.1|DC947692
EST:     NTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208380911|gb|DC919849.1|DC919849
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGNCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67723849|gb|BJ974108.1|BJ974108
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37839894|gb|BJ597902.1|BJ597902
EST:     CTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726237|gb|BJ976496.1|BJ976496
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67720736|gb|BJ970995.1|BJ970995
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724727|gb|BJ974986.1|BJ974986
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162216576|gb|FC392473.1|FC392473
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67728084|gb|BJ978343.1|BJ978343
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37837080|gb|BJ595088.1|BJ595088
EST:     GGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: GGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208373838|gb|DC956326.1|DC956326
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162267787|gb|FC443777.1|FC443777
EST:     TTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|18336612|gb|BJ168635.1|BJ168635
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACAGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727522|gb|BJ977781.1|BJ977781
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACNCCNTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67720095|gb|BJ970354.1|BJ970354
EST:     GTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: GTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724148|gb|BJ974407.1|BJ974407
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37835389|gb|BJ593401.1|BJ593401
EST:     TTCATCAACACCCGGCGGAAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: TTCATCAACACCCGGCGG-AAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162190961|gb|FC368367.1|FC368367
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726728|gb|BJ976987.1|BJ976987
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37827727|gb|BJ585739.1|BJ585739
EST:     AAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: AAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|18334375|gb|BJ166392.1|BJ166392
EST:     ACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: ACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726769|gb|BJ977028.1|BJ977028
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724415|gb|BJ974674.1|BJ974674
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGANCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37852073|gb|BJ610081.1|BJ610081
EST:     TTCATCAACACCCGGCGGAAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: TTCATCAACACCCGGCGG-AAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727223|gb|BJ977482.1|BJ977482
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37835652|gb|BJ593664.1|BJ593664
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37853556|gb|BJ611564.1|BJ611564
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|18335405|gb|BJ167424.1|BJ167424
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|18335581|gb|BJ167601.1|BJ167601
EST:     GGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: GGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208370152|gb|DC944391.1|DC944391
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67723948|gb|BJ974207.1|BJ974207
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726431|gb|BJ976690.1|BJ976690
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726108|gb|BJ976367.1|BJ976367
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|18337172|gb|BJ169196.1|BJ169196
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67720451|gb|BJ970710.1|BJ970710
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67725327|gb|BJ975586.1|BJ975586
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGGGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37827634|gb|BJ585646.1|BJ585646
EST:     NTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37832981|gb|BJ590993.1|BJ590993
EST:     GGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: GGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727913|gb|BJ978172.1|BJ978172
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         C
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacag-
EST: gi|67727913|gb|BJ978172.1|BJ978172
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         C
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacag-
EST: gi|67726901|gb|BJ977160.1|BJ977160
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162190960|gb|FC368366.1|FC368366
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726858|gb|BJ977117.1|BJ977117
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162276617|gb|FC452195.1|FC452195
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37851398|gb|BJ609406.1|BJ609406
EST:     CTTCATCANCACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726971|gb|BJ977230.1|BJ977230
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727579|gb|BJ977838.1|BJ977838
EST:     CTTCATCAACACTCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37820998|gb|BJ579064.1|BJ579064
EST:     GTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: GTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67720333|gb|BJ970592.1|BJ970592
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|100375034|gb|BY949162.1|BY949162
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724212|gb|BJ974471.1|BJ974471
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208361959|gb|DC950450.1|DC950450
EST:     NTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208361616|gb|DC950318.1|DC950318
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208386308|gb|DC953021.1|DC953021
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162253750|gb|FC429864.1|FC429864
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162201979|gb|FC376977.1|FC376977
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37847186|gb|BJ605194.1|BJ605194
EST:     ACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: ACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67725537|gb|BJ975796.1|BJ975796
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727351|gb|BJ977610.1|BJ977610
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208351969|gb|DC925778.1|DC925778
EST:     CGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67720105|gb|BJ970364.1|BJ970364
EST:     ACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: ACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162195996|gb|FC372687.1|FC372687
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726687|gb|BJ976946.1|BJ976946
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGNCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67723953|gb|BJ974212.1|BJ974212
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724946|gb|BJ975205.1|BJ975205
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162156058|gb|FC332225.1|FC332225
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67725629|gb|BJ975888.1|BJ975888
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67720323|gb|BJ970582.1|BJ970582
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37821447|gb|BJ579513.1|BJ579513
EST:     GTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: GTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162187052|gb|FC362834.1|FC362834
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208373261|gb|DC944932.1|DC944932
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162167743|gb|FC344057.1|FC344057
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727900|gb|BJ978159.1|BJ978159
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67727221|gb|BJ977480.1|BJ977480
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162231378|gb|FC406801.1|FC406801
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67726613|gb|BJ976872.1|BJ976872
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724165|gb|BJ974424.1|BJ974424
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|37848387|gb|BJ606395.1|BJ606395
EST:     CTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67723610|gb|BJ973869.1|BJ973869
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|208375292|gb|DC945019.1|DC945019
EST:     TTTCATCAACACCCGGCGGAAGGTGGACTGGTNGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162255883|gb|FC431959.1|FC431959
EST:     ATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: ATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|67724768|gb|BJ975027.1|BJ975027
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
EST: gi|162177225|gb|FC352654.1|FC352654
EST:     CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCG                         CCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC
genomic: CTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 29 (downstream exon)
Score: 12

GACACCCTGTGCGACCTGTACGAGACATTGGCGATCACCCAGAGCGTGATCTTCATCAACACCCGGCGGAAGGTGGACTGGTTGACGGACAAGATGCGCGgtagggagat ... ggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCCGGGACATCATCATGCGAGAGTTCCGTTCGGGGTCTTCCCGAGTTTTGAT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtctgacattgagtgggtcgtgttttttttctttttctttgtggggatggacagCCCGTGACCACACCGTGTCGGCCACTCACGGAGACATGGATCAGAACACCCGGGACATCATCATGCGAGAGTTCCGTTCGGGGTCTTCCCGAGTTTTGAT
 gtctgac  putative branch site (score: 12)
                       ttttttttctttttct  TA-rich tract