1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgcgctgtttcttttttaaattattatcctgaaattcttgaaattgttgcatcattatctcaaatcgcctttcaactatctttcatcctcttacacaattacctgcaataccatatcgttttttcagtttttgtcacatccattaacggaagcatcctggaagtaatacagGAGATGACGAAGAAGTGGGGCTGCACAACAGCTGGCGAGGCTCAGCAGATTCCACATGCAGCGCTAGTGGCTTGCTTTGGCGACCGTCTCGGCACATATG
species | Physcomitrella patens |
transcript | PP1S69_54V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TGGCAAGCTTGGCGAG GAGATGACGAAGAAGTGGGGCTGCACAACAGCTGGCGAGGCTCAGCAGATTEST: gi|18366409|gb|BJ198488.1|BJ198488
genomic: TGGCAAGCTTGGCGAGgtgcgctgtt ... agtaatacagGAGATGACGAAGAAGTGGGGCTGCACAACAGCTGGCGAGGCTCAGCAGATT
EST: TGGGTGGCAAGCTTGGCGAG GAGATGACGAAGAAGTGGGGCTGCACAACAGCTGGCGAGGCTCAGCAGATT
genomic: TGGGTGGCAAGCTTGGCGAGgtgcgctgtt ... agtaatacagGAGATGACGAAGAAGTGGGGCTGCACAACAGCTGGCGAGGCTCAGCAGATT
cgttttttcagtttttgtcacatccattaacggaagcatcctggaagtaatacagGAGATGACGAAGAAGTGGGGCTGCACAACAGCTGGCGAGGCTCAGCAGATTCCACATGCAGCGCTAGTGGCTTGCTTTGGCGACCGTCTCGGCACATATG
cattaac putative branch site (score: 1)
aagtaata TA-rich tract