1 5' 3' | 2 5' 3' |
...tgtagttgagaatcacatcaacagtgttgctggttgttaagagtggatgacgaggaggagaattattgttgcagccaagactgattcttaagcactgcagGACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCTCTATATGCTTTG
species | Physcomitrella patens |
transcript | PP1S61_59V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GACGAGAGCCTCGGCAATGGCTCATGTGCTACCTAAATCCATTGCAATAG G-C----TATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCTEST: gi|208365094|gb|DC947330.1|DC947330
genomic: GACGAGAGCCTCGGCAATGGCTCATGTGCTACCTAAATCCATTGCAATAGgtctgagcct ... agcactgcagGACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCT
EST: GACGAGAGCCTCGGCAATGGCTCATGTGCTACCTAAATCCATTGCAATAG GACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCTEST: gi|37851706|gb|BJ609714.1|BJ609714
genomic: GACGAGAGCCTCGGCAATGGCTCATGTGCTACCTAAATCCATTGCAATAGgtctgagcct ... agcactgcagGACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCT
EST: GACGAGAGCCTCGGCAATGGCTCATGTGCTACCTAAATCCATTGCAATAG GACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCT
genomic: GACGAGAGCCTCGGCAATGGCTCATGTGCTACCTAAATCCATTGCAATAGgtctgagcct ... agcactgcagGACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCT
gatgacgaggaggagaattattgttgcagccaagactgattcttaagcactgcagGACAGGCTATGGAGTCCTGCTTCGAGTACATTTCACGTGTTTGCACCCGCTCTATATGCTTTG
gactgat putative branch site (score: 4)
aattattgtt TA-rich tract