1 5' 3' | 2 5' 3' |
...cgataacactcgacaatacagcttttgtagtgtgctcagtgattactcgtatatttattgtatatttccttatgaaacgtgacccggctctaccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCGGAGCCTCTTCCTGATATGAATATGCCGTCTCAGGCAGTGTGGTCCTGA
species | Physcomitrella patens |
transcript | PP1S61_57V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162253843|gb|FC430152.1|FC430152
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162238524|gb|FC414610.1|FC414610
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|15728725|gb|BI740940.1|BI740940
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|18328994|gb|BJ161000.1|BJ161000
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|67692582|gb|BJ952815.1|BJ952815
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162201142|gb|FC377649.1|FC377649
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162167757|gb|FC344071.1|FC344071
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: TCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|37838985|gb|BJ596993.1|BJ596993
genomic: TCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: TTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162167758|gb|FC344072.1|FC344072
genomic: TTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|67569322|gb|BJ942146.1|BJ942146
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|208371829|gb|DC951835.1|DC951835
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: ATTCCTCTTTGACGGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162168724|gb|FC344714.1|FC344714
genomic: ATTCCTCTTTGAC-GGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|18356302|gb|BJ188361.1|BJ188361
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCGTCAAACAGGCEST: gi|162273907|gb|FC450046.1|FC450046
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162267422|gb|FC443965.1|FC443965
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|100413413|gb|BY956659.1|BY956659
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162270077|gb|FC446777.1|FC446777
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|208355471|gb|DC938816.1|DC938816
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162238525|gb|FC414611.1|FC414611
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|37833234|gb|BJ591246.1|BJ591246
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCGTCAAACAGGCEST: gi|208344666|gb|DC905115.1|DC905115
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAAGCEST: gi|162216231|gb|FC392648.1|FC392648
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGGEST: gi|18361093|gb|BJ193157.1|BJ193157
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162267423|gb|FC443966.1|FC443966
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|18337202|gb|BJ169226.1|BJ169226
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162270076|gb|FC446776.1|FC446776
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|67699199|gb|BJ959432.1|BJ959432
genomic: CGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCEST: gi|162216232|gb|FC392649.1|FC392649
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
EST: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAG CTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
genomic: CATTCCTCTTTGACGGCCGTCGTCTTCGAGCTGAACAGACACCTGCTGAGgtattccctt ... taccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGC
ctcgtatatttattgtatatttccttatgaaacgtgacccggctctaccctgcagCTCGACATGGAAGATGGTGACGAGATTGATGCCATGCTCCATCAAACAGGCGGAGCCTCTTCCTGATATGAATATGCCGTCTCAGGCAGTGTGGTCCTGA
ctctaccct CT-rich tract
atatttattgtatatt TA-rich tract