1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ttctgaatgtgcagtagagttcgtcttgtcttcgttgaaactaacttaccttctcttgataaccccctttttttcttttctttttttttgtctgtggtagGATAATGAATCGATTAAACGACTTGGATTTTCTATCAGGGTTTGGGAAAAAAAAGACGTGAACAATCTACTTCATTTTCATAGCCTTTGCAAGGTTCTTA
species | Physcomitrella patens |
transcript | PP1S61_292V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATTTCCTAACTAAAGAAGTATAAGTTGAAGACAGACTTGTTACAATGCAG GATAATGAATCGATTAAACGACTTGGATTTTCTATCAGGGTTTGGGNNNNN
genomic: ATTTCCTAACTAAAGAAGTATAAGTTGAAGACAGACTTGTTACAATGCAGgtcagtgatt ... tctgtggtagGATAATGAATCGATTAAACGACTTGGATTTTCTATCAGGGTTTGGGAAAAA
ttaccttctcttgataaccccctttttttcttttctttttttttgtctgtggtagGATAATGAATCGATTAAACGACTTGGATTTTCTATCAGGGTTTGGGAAAAAAAAGACGTGAACAATCTACTTCATTTTCATAGCCTTTGCAAGGTTCTTA
tgataac putative branch site (score: 57)
ctcttgataaccccct CT-rich tract
tttttttcttttcttt TA-rich tract