Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cgcttggttagtacaatcaaatgtgaaccgtcacttcgtggtcacattgcaatcgttggtatggaatgcgtattctaatgaaatgtaaattgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT

Basic information

species Physcomitrella patens
transcript PP1S61_268V6.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S61_268V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EDP05439 (Chlamydomonas reinhardtii), 3'ss of exon 2
cgcttggttagtacaatcaaatgtgaaccgtcacttcgtggtcacattgcaatcgttggtatggaatgcgtattctaatgaaatgtaaattgtt-tgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT
                                  |  ||   |   ||||||   |    |    | ||     || | |   | |    ||   |  ||| || |||||||||||||||||||||||||| || || ||||| ||  | ||||| || || |||||||| ||||||||||| |||||||| ||||  || 
---------------------------------gtgagtaaacggcttgcaaatttatcaagcatacgccggaactgacgcgctctcttctgccctcgcagCGGCATTGAGGCCAAGCAGCCCAACTCTGCCATTCGCAAGTGCGCGCGTGTGCAGCTGATCAAGAACGGCAAGAAGATTGCCGCCTTCGTCCCCATGGAC

upper sequence: PP1S61_268V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ31369 (Selaginella moellendorffii), 3'ss of exon 2
cgcttggttagtacaatcaaatgtgaaccgtcacttcgtggtcacattgcaatcgttggtatggaatgcgtattctaatgaaatgtaaattgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT
                                              |    |  || | |     || ||  |||    ||    |   || |    ||||||||| |||||||||||||||||||| || || || || || || ||||| || || || || ||||| |||||||| || || || || |||||||||
---------------------------------------------gtaagcaaagtcgcttctcgattcgatttccctcgattgatctgttttcgcgcagTGGTATCGAGGCCAAGCAGCCCAACTCCGCCATTCGAAAATGCGCGAGAGTTCAGCTCATCAAAAACGGCAAGAAGATCGCGGCGTTTGTCCCCAACGAT

upper sequence: PP1S61_268V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ06574 (Selaginella moellendorffii), 3'ss of exon 2
cgcttggttagtacaatcaaatgtgaaccgtcacttcgtggtcacattgcaatcgttggtatggaatgcgtattctaatgaaatgtaaattgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT
                                              |    |  || | |     || ||  |||    ||    |   || |    ||||||||| |||||||||||||||||||| || || || || || || ||||| || || || || ||||| |||||||| || || ||||| |||||||||
---------------------------------------------gtaagcaaagtcgcttctcgattcgatttccctcgattgatctgttttcgcgcagTGGTATCGAGGCCAAGCAGCCCAACTCCGCCATTCGAAAATGCGCGAGAGTTCAGCTCATCAAAAACGGCAAGAAGATCGCGGCGTTCGTCCCCAACGAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162218830|gb|FC394373.1|FC394373
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137884|gb|BI894748.1|BI894748
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAGT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|19789259|gb|BQ041199.1|BQ041199
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162218829|gb|FC394372.1|FC394372
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162241806|gb|FC418061.1|FC418061
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162279184|gb|FC455731.1|FC455731
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137650|gb|BI894514.1|BI894514
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137630|gb|BI894494.1|BI894494
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162263100|gb|FC440078.1|FC440078
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162218663|gb|FC394629.1|FC394629
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137566|gb|BI894430.1|BI894430
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|15727797|gb|BI740468.1|BI740468
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162259712|gb|FC436731.1|FC436731
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67726745|gb|BJ977004.1|BJ977004
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162224659|gb|FC401907.1|FC401907
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|19788029|gb|BQ040701.1|BQ040701
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67703208|gb|BJ963441.1|BJ963441
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162262846|gb|FC438758.1|FC438758
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162243719|gb|FC421840.1|FC421840
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162208658|gb|FC385055.1|FC385055
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162235889|gb|FC411632.1|FC411632
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18354999|gb|BJ187058.1|BJ187058
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137633|gb|BI894497.1|BI894497
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162263099|gb|FC440077.1|FC440077
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137503|gb|BI894367.1|BI894367
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37831610|gb|BJ589622.1|BJ589622
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18355237|gb|BJ187296.1|BJ187296
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67508378|gb|BJ941245.1|BJ941245
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162205129|gb|FC381227.1|FC381227
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162206582|gb|FC382951.1|FC382951
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137577|gb|BI894441.1|BI894441
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18330307|gb|BJ162313.1|BJ162313
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162224658|gb|FC401906.1|FC401906
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162235888|gb|FC411631.1|FC411631
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162244185|gb|FC423762.1|FC423762
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162259128|gb|FC436422.1|FC436422
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|15590646|gb|BI675262.1|BI675262
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162206104|gb|FC383097.1|FC383097
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67508110|gb|BJ940981.1|BJ940981
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|208351940|gb|DC917973.1|DC917973
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37833662|gb|BJ591674.1|BJ591674
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162253922|gb|FC430192.1|FC430192
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162274149|gb|FC450221.1|FC450221
EST:     AAGCCATTCGCTGGTTCCTCTCACTCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67575578|gb|BJ948402.1|BJ948402
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TTGGTATTGAGGCCAAGCAGCCCAACTCTG
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagT-GGTATTGAGGCCAAGCAGCCCAACTCTG
EST: gi|162202115|gb|FC378036.1|FC378036
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162202114|gb|FC378035.1|FC378035
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|15729859|gb|BI741523.1|BI741523
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18326235|gb|BJ158234.1|BJ158234
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67573196|gb|BJ946020.1|BJ946020
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGNTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCANAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162218239|gb|FC394218.1|FC394218
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|19790194|gb|BQ041747.1|BQ041747
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162205218|gb|FC380900.1|FC380900
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|19780542|gb|BQ039573.1|BQ039573
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|19781174|gb|BQ039663.1|BQ039663
EST:     AAGCCATTCGCTGGTTCCTCTCACACCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162259713|gb|FC436732.1|FC436732
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67701005|gb|BJ961238.1|BJ961238
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18351545|gb|BJ183597.1|BJ183597
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67691994|gb|BJ952227.1|BJ952227
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162219792|gb|FC396204.1|FC396204
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162205128|gb|FC381226.1|FC381226
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137645|gb|BI894509.1|BI894509
EST:     CTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: CTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18334010|gb|BJ166026.1|BJ166026
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37832188|gb|BJ590200.1|BJ590200
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67568799|gb|BJ941623.1|BJ941623
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162251254|gb|FC428533.1|FC428533
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|19776363|gb|BQ039071.1|BQ039071
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137634|gb|BI894498.1|BI894498
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAAG
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGA-G
EST: gi|19780982|gb|BQ039636.1|BQ039636
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18356721|gb|BJ188780.1|BJ188780
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162242648|gb|FC415013.1|FC415013
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|208393468|gb|DC904072.1|DC904072
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67572345|gb|BJ945169.1|BJ945169
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162218240|gb|FC394219.1|FC394219
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137560|gb|BI894424.1|BI894424
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18338126|gb|BJ170150.1|BJ170150
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162242018|gb|FC418377.1|FC418377
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67578138|gb|BJ950305.1|BJ950305
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162251253|gb|FC428532.1|FC428532
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137617|gb|BI894481.1|BI894481
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67699052|gb|BJ959285.1|BJ959285
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137607|gb|BI894471.1|BI894471
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37830890|gb|BJ588902.1|BJ588902
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137619|gb|BI894483.1|BI894483
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162274150|gb|FC450222.1|FC450222
EST:     AAGCCATTCGCTGGTTCCTCTCACTCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67571553|gb|BJ944377.1|BJ944377
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37821797|gb|BJ579863.1|BJ579863
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67691327|gb|BJ951560.1|BJ951560
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137517|gb|BI894387.1|BI894387
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37850912|gb|BJ608920.1|BJ608920
EST:     AANCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTNTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCANCTNTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162238470|gb|FC417377.1|FC417377
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|15590615|gb|BI675231.1|BI675231
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGCTCTGGAGAAAAT                         TGGTATTGAGGCCAAGGAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162244186|gb|FC423763.1|FC423763
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18334157|gb|BJ166173.1|BJ166173
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162253921|gb|FC430191.1|FC430191
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137688|gb|BI894552.1|BI894552
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|67718257|gb|BJ968516.1|BJ968516
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162273790|gb|FC449721.1|FC449721
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|37835391|gb|BJ593403.1|BJ593403
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162252892|gb|FC429265.1|FC429265
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18353918|gb|BJ185973.1|BJ185973
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|16137651|gb|BI894515.1|BI894515
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|162261622|gb|FC438055.1|FC438055
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
EST: gi|18342654|gb|BJ174689.1|BJ174689
EST:     AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAAT                         TGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT
genomic: AAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 35 (downstream exon)
Score: 112

TGTGGGCTGACAAGTCCTACAAGAAATCTCACTTGGGTAACGAGTGGAAGAAGCCATTCGCTGGTTCCTCTCACGCCAAGGGTATCGTTCTGGAGAAAATgtgagtatga ... tgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attgcaatcgttggtatggaatgcgtattctaatgaaatgtaaattgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT
                           ttctaat  putative branch site (score: 112)
                         tattctaatgaaatgt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
cgcttggttagtacaatcaaatgtgaaccgtcacttcgtggtcacattgcaatcgttggtatggaatgcgtattctaatgaaatgtaaattgtttgacagTGGTATTGAGGCCAAGCAGCCCAACTCTGCAATCCGTAAGTGTGCCAGAGTGCAACTTATTAAGAACGGAAAGAAGATTGCTGCCTTCGTTCCCAACGAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC