Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100435104|gb|BY979074.1|BY979074EST: TGAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTTACAAGACGAG AGGCAACCGTGAGGGAGCTCCCTAACCTTGTCCAGAGCCGTGTGGAGTTGA
genomic: TGAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTTACAAGACGAGgtttgatttc ... gcattcgtagAGGCAACCGTGAGGGAGCTCCCTAACCTTGTCCAGAGCCGTGTGGAGTTGA
EST:
gi|100430938|gb|BY959945.1|BY959945EST: TGAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTTACAAGACGAG AGGCAACCGTGAGGGAGCTCCCTAACCTTGTCCAGAGCCGTGTGGAGTTGA
genomic: TGAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTTACAAGACGAGgtttgatttc ... gcattcgtagAGGCAACCGTGAGGGAGCTCCCTAACCTTGTCCAGAGCCGTGTGGAGTTGA
EST:
gi|162166675|gb|FC342644.1|FC342644EST: GAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTTACAAGACGAGATGCATTCGTAG
genomic: GAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTT-----AC-A-A-G-A--CG-AGgtttgatttc ...
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCCATTGATGCTCCGTGAAGTTCAACTCGGTGCAGCGTGTGCACAATCGTTGAGCAACTTGTGCGGAGCTGGCTTCGTTCATCTCTCCTTACAAGACGAGgtttgatttctatgcctgctttctctttcgggtgtaggtcttatcaatcgcaagcagatcgaagctttggcaaagtgtagcctaccgggcacaaattgcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT