1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tacgaaagtagttatgtgtttagcaaggcgggctttctgattcaatacaagtttgcaaacaattagggggcattcaattgacaatgtgtgtacccttcagCGTTTAATGCTCGATCAAGCTGCAACTGCCTACACGGGGAAAGGAGCACCAGCTCCCAAGCCACAGGCAAGCGTAACAACAGCTTAAGTATGCCATTCAA
species | Physcomitrella patens |
transcript | PP1S61_193V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTGTGCATATTCCGGATAATGTGGACATCATGAAACTCGTGGAAGAGAGG CGTTTAATGCTCGATCAAGCTGCAACTGCCTACACGGGGAAAGGAGCACCAEST: gi|37821266|gb|BJ579332.1|BJ579332
genomic: TTGTGCATATTCCGGATAATGTGGACATCATGAAACTCGTGGAAGAGAGGgtgagtgtca ... tacccttcagCGTTTAATGCTCGATCAAGCTGCAACTGCCTACACGGGGAAAGGAGCACCA
EST: TTGTGCATATTCCGGATAATGTGGACATCATGAAACTCGTGGAAGAGAGG CGTTTAATGCTCGATCAAGCTGCAACTGCCTACACGGGGAAAGGAGCACCA
genomic: TTGTGCATATTCCGGATAATGTGGACATCATGAAACTCGTGGAAGAGAGGgtgagtgtca ... tacccttcagCGTTTAATGCTCGATCAAGCTGCAACTGCCTACACGGGGAAAGGAGCACCA
tacaagtttgcaaacaattagggggcattcaattgacaatgtgtgtacccttcagCGTTTAATGCTCGATCAAGCTGCAACTGCCTACACGGGGAAAGGAGCACCAGCTCCCAAGCCACAGGCAAGCGTAACAACAGCTTAAGTATGCCATTCAA
aattgac putative branch site (score: 1)
tacccttc putative PPT
aaacaatta TA-rich tract