1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaatactctctacactaacctgcttgacgtgtcacattcgcattcaaattcctttcaaattctgcaaaaattctcccgtcatcttcatctctccattcctttctttctgcctctctctctcgcgttagtcagtaacgatttttgcagGTCGCTTCCGCAAAACCTACTGGCAACAGAAAGTTCCAAAGATGGGTTTTCCGAGGCTACGACTTTAAGGTGATTCGGATCTGGTCTTCCTGGCTTGTGC
species | Physcomitrella patens |
transcript | PP1S424_5V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACTCTGTGACGCGAAATCAGTATGAAGCCTTAATGTGCATGTTGTTGCAG GTCGCTTCCGCAAAACCTACTGGCAACAGAA
genomic: ACTCTGTGACGCGAAATCAGTATGAAGCCTTAATGTGCATGTTGTTGCAGgtaatactct ... atttttgcagGTCGCTTCCGCAAAACCTACTGGCAACAGAA
ccattcctttctttctgcctctctctctcgcgttagtcagtaacgatttttgcagGTCGCTTCCGCAAAACCTACTGGCAACAGAAAGTTCCAAAGATGGGTTTTCCGAGGCTACGACTTTAAGGTGATTCGGATCTGGTCTTCCTGGCTTGTGC
cagtaac putative branch site (score: 2)
tttttgc putative PPT
attttt TA-rich tract