Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100397016|gb|BY953942.1|BY953942EST: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAG AATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
genomic: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAGgtatgatgcc ... gcgaggttagAATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
EST:
gi|18354775|gb|BJ186833.1|BJ186833EST: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAG AATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
genomic: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAGgtatgatgcc ... gcgaggttagAATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTTCTCTTCCATATGCAAAAACCACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAGgtatgatgcctcttcttcccctttctctgggcactatgtgttacactgtggagctaagcagttgtcaagtgcacgcgcagtgatgagttgtcatgaaggttggattgacgtgcttcacattgttgcactgcgaggttag
- - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - AGTGGA