1 5' 3' | 2 5' 3' |
gtatgatgcctcttcttcccctttctctgggcactatgtgttacactgtggagctaagcagttgtcaagtgcacgcgcagtgatgagttgtcatgaaggttggattgacgtgcttcacattgttgcactgcgaggttagAATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGGCGATGGCTCAGCAACACATGACGCTCTTGGCGTCCGCATGTTTGCTCTT
species | Physcomitrella patens |
transcript | PP1S39_169V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAG AATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGGEST: gi|18354775|gb|BJ186833.1|BJ186833
genomic: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAGgtatgatgcc ... gcgaggttagAATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
EST: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAG AATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
genomic: ACCTCGAGCTTACAGCAGGTCTAGTGGATCTAGCAACGCTTCTCTTGCAGgtatgatgcc ... gcgaggttagAATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGG
gagttgtcatgaaggttggattgacgtgcttcacattgttgcactgcgaggttagAATTCAGAAAAACCATATCCTAGTGCACACAGGGGACACAACTACCCGAGGCGATGGCTCAGCAACACATGACGCTCTTGGCGTCCGCATGTTTGCTCTT
gattgac putative branch site (score: 3)