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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacactccactccttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca...

Basic information

species Physcomitrella patens
transcript PP1S39_130V6.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: LOC_Os08g02400.1 (Oryza sativa), 5'ss of exon 4
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacac-tccactc-cttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca
|||||||||| |||||  |  | ||  |  | |||||| |  ||||| | || |||||||||||||||||||||||||||||||| || |||||||||||||||||   | | |  |||||   || |||     |    ||||| |  | ||  |   | |  |    ||| |      |||   ||    |   | ||| 
ACAAGGACTCCAAGTTTAGGCTCATCCTTGTTGAGAGCAGGATCCACCGCCTCGCTCGCTACTACAAGCGCACCAAGAAGCTCCCGCCCACCTGGAAGTAgtaagttacacctcgcccacttgtttgtattgtttgttagttgttta--attgttagtcacatataactttactagtgtgctgttcttagttaggttcagct

upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: LOC_Os08g02410.1 (Oryza sativa), 5'ss of exon 4
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacactccactccttctatctgaggaatattgttgaggaatgacatgaatagg---tgggcttaatttcactctgcagt--ttcacattattagca
|||||||||| |||||| |  | ||| |  | |||||| |  ||||| | || || |||||||| |||||||| ||||||||||| || |||||||||||||||||   |   | |   |     | ||       | ||  |    |||    ||| || |   ||    || |   | | |  |||  |      | | |   
ACAAGGACTCCAAGTTCAGGCTTATTCTTGTTGAGAGCAGGATCCACCGCCTCGCCCGCTACTATAAGCGCACAAAGAAGCTCCCACCCACCTGGAAGTAgtaagtcacattgcccacatggccatttcctcttgttgttcctac--aattctttgattatgctatgtatgtagtacgattttaaagtagtctgtgctgtga---

upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GRMZM5G852185_T04 (Zea mays), 5'ss of exon 4
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagt-agtaacactccactccttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca
|||||||||| || ||| || | ||| |  | |||||| |  ||||| | || || |||||||||||||| |||||||||||||| || ||||||||||||||||| |   | |  ||| |||||   |        ||    ||    ||  | ||||     |   |     |   |    |  |      | ||    
ACAAGGACTCCAAATTCAGACTCATTCTTGTTGAGAGCAGGATCCACCGCCTTGCCCGCTACTACAAGCGTACCAAGAAGCTCCCACCCACCTGGAAGTAgtaagtcaaccagatcccattccttgcctgctcttgctagcagtgcctgattgcctgaaccatggatttgtgaattgatagctatctaagtgatgttttt-

upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GRMZM2G158034_T02 (Zea mays), 5'ss of exon 2
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagt-agtaacactccactccttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcac-tctgcagtttcacattattagca
|||| |||||||| ||| |  | ||| |  | |||||| |  ||||| | || || ||||||||||||||||| |||||||| || || ||||||||||||||||| |   | |  ||| |||||    || |   ||   |||| | | || ||   ||    | | ||  | |||  | |    | | | | |    |  
ACAAAGACTCTAAATTCAGGCTCATTCTTGTGGAGAGCAGGATCCACCGCCTTGCCCGCTACTACAAGCGCACAAAGAAGCTTCCACCCACCTGGAAGTAgtaagtcaaccagaacccattcctt--gcctcaaccatggagttgcgaactgtcagttatcttggtgatttgtatcatgtgtttgatgtgagagtcaatgtg

upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA17G14370.1 (Glycine max), 5'ss of exon 4
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacactccactcctt-ctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca-
|||||||||| |||||| | |||||| |  | |||||| |  ||||| | || |||||||||||||||   |||||||||||||| ||   ||||||||||||||||  ||    |||| | |  |  |   | || | |  |      ||   || |||   |    ||| |  | ||  |    || |   ||  ||   
ACAAGGACTCCAAGTTCAGGTTGATTCTTGTTGAGAGCAGAATCCACCGACTTGCTCGCTACTACAAGAAGACCAAGAAGCTCCCACCAGTCTGGAAGTAgtaagtaccaagttcccacccatcaccctgctatgactctcttgctattattttatcaatgcatt--tttagtgactctaagtgtgtttaaggtaaaagttc

upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ28020 (Selaginella moellendorffii), 5'ss of exon 4
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacactccactccttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca
|||||||||| ||||||||  | ||  | ||||||||| | |||||| | || ||  | ||||||||| | |||||||||||||| || ||||||||||||| |||  |       | ||| ||||| ||      |||        | | || |  ||     |  || || |      ||||                
ACAAGGACTCCAAGTTCCGCCTCATCCTCATCGAGAGCAGAGTCCACCGCCTCGCAAGATACTACAAGAGGACCAAGAAGCTCCCTCCAACCTGGAAGTAgtgagtgttcttttctctctcgttctagctc-----tatctccagaaacttaccttgatcttacgtgttgatcttg----gcag----------------

upper sequence: PP1S39_130V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ29450 (Selaginella moellendorffii), 5'ss of exon 4
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacactccactccttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca
|||||||||| ||||||||  | ||  | ||||||||| | |||||| | || ||  | ||||||||| | |||||||||||||| || ||||||||||||| ||| ||    ||   |||  ||  ||| ||   ||         | | || |  ||     |  || || |      ||||                
ACAAGGACTCCAAGTTCCGCCTCATCCTCATCGAGAGCAGAGTCCACCGCCTCGCAAGATACTACAAGAGGACCAAGAAGCTCCCTCCAACCTGGAAGTAgtgagt-gttcttcttttctctctcgttct-agttctagctccagaaacttacgttgatcttacgtgttgatcttg----gcag----------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22132992|gb|BQ827474.1|BQ827474
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|208359494|gb|DC954047.1|DC954047
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162210600|gb|FC386288.1|FC386288
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|22133100|gb|BQ827545.1|BQ827545
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTA
EST: gi|18329090|gb|BJ161096.1|BJ161096
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAA
EST: gi|162251500|gb|FC425568.1|FC425568
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|7047321|gb|AW477215.1|AW477215
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCT
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCT
EST: gi|18331602|gb|BJ163613.1|BJ163613
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATT
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATT
EST: gi|67718574|gb|BJ968833.1|BJ968833
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67694411|gb|BJ954644.1|BJ954644
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|7147701|gb|AW509672.1|AW509672
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCT
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCT
EST: gi|162226813|gb|FC403833.1|FC403833
EST:     CTAGCTCGTTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         GGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162220214|gb|FC395452.1|FC395452
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162216545|gb|FC392442.1|FC392442
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|19789090|gb|BQ041086.1|BQ041086
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGA
EST: gi|162207481|gb|FC383726.1|FC383726
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67573655|gb|BJ946479.1|BJ946479
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18350783|gb|BJ182834.1|BJ182834
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAAT
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAAT
EST: gi|18334605|gb|BJ166622.1|BJ166622
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGNAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162208654|gb|FC385051.1|FC385051
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162216546|gb|FC392443.1|FC392443
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162277647|gb|FC453278.1|FC453278
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162213744|gb|FC390359.1|FC390359
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162223409|gb|FC400612.1|FC400612
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162206049|gb|FC382834.1|FC382834
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162273540|gb|FC449685.1|FC449685
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18365642|gb|BJ197719.1|BJ197719
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162250659|gb|FC428250.1|FC428250
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|208348509|gb|DC901972.1|DC901972
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162252525|gb|FC427334.1|FC427334
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67721894|gb|BJ972153.1|BJ972153
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|208396507|gb|DC915819.1|DC915819
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|37844499|gb|BJ602507.1|BJ602507
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|19789335|gb|BQ041247.1|BQ041247
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCT
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCT
EST: gi|67726057|gb|BJ976316.1|BJ976316
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162221403|gb|FC398551.1|FC398551
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|15326964|gb|BI487412.1|BI487412
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCT
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCT
EST: gi|37849583|gb|BJ607591.1|BJ607591
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67699675|gb|BJ959908.1|BJ959908
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162243737|gb|FC419570.1|FC419570
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67699985|gb|BJ960218.1|BJ960218
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18332530|gb|BJ164543.1|BJ164543
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162242066|gb|FC415799.1|FC415799
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162218894|gb|FC394853.1|FC394853
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162249755|gb|FC425621.1|FC425621
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18373991|gb|BJ205569.1|BJ205569
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAA
EST: gi|7648307|gb|AW739290.1|AW739290
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162241644|gb|FC414714.1|FC414714
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|37845765|gb|BJ603773.1|BJ603773
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67716818|gb|BJ967077.1|BJ967077
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162241074|gb|FC417732.1|FC417732
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162275050|gb|FC450909.1|FC450909
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162218893|gb|FC394852.1|FC394852
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162221402|gb|FC398550.1|FC398550
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162224521|gb|FC399897.1|FC399897
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18343554|gb|BJ175592.1|BJ175592
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAG
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAG
EST: gi|19777591|gb|BQ039200.1|BQ039200
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGA
EST: gi|162261931|gb|FC437322.1|FC437322
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162213743|gb|FC390358.1|FC390358
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162258894|gb|FC434901.1|FC434901
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162277488|gb|FC453431.1|FC453431
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162240094|gb|FC414906.1|FC414906
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|37825605|gb|BJ583671.1|BJ583671
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67717542|gb|BJ967801.1|BJ967801
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|19789400|gb|BQ041287.1|BQ041287
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|22491733|gb|BU051656.1|BU051656
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162277648|gb|FC453279.1|FC453279
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18345466|gb|BJ177509.1|BJ177509
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAG
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAG
EST: gi|67727006|gb|BJ977265.1|BJ977265
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162278156|gb|FC454391.1|FC454391
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18338127|gb|BJ170151.1|BJ170151
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162206048|gb|FC382833.1|FC382833
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162203844|gb|FC379941.1|FC379941
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         AGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162256845|gb|FC432947.1|FC432947
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162224522|gb|FC399898.1|FC399898
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162260676|gb|FC436680.1|FC436680
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         GGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67725336|gb|BJ975595.1|BJ975595
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162210991|gb|FC387297.1|FC387297
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|37830110|gb|BJ588122.1|BJ588122
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67571097|gb|BJ943921.1|BJ943921
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAA
EST: gi|162210992|gb|FC387298.1|FC387298
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCNA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162259175|gb|FC435208.1|FC435208
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162243736|gb|FC419569.1|FC419569
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|22132980|gb|BQ827468.1|BQ827468
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162226469|gb|FC402436.1|FC402436
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162256846|gb|FC432948.1|FC432948
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162261932|gb|FC437323.1|FC437323
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|7287001|gb|AW599488.1|AW599488
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67721527|gb|BJ971786.1|BJ971786
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67723613|gb|BJ973872.1|BJ973872
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162210601|gb|FC386289.1|FC386289
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67697041|gb|BJ957274.1|BJ957274
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|208373421|gb|DC941046.1|DC941046
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162250660|gb|FC428251.1|FC428251
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67719812|gb|BJ970071.1|BJ970071
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162207480|gb|FC383725.1|FC383725
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|67709540|gb|BJ965356.1|BJ965356
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162275049|gb|FC450908.1|FC450908
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18326618|gb|BJ158617.1|BJ158617
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGA
EST: gi|67728074|gb|BJ978333.1|BJ978333
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162249754|gb|FC425620.1|FC425620
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|19782925|gb|BQ039937.1|BQ039937
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTA
EST: gi|37822754|gb|BJ580820.1|BJ580820
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|18335091|gb|BJ167109.1|BJ167109
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|37824519|gb|BJ582585.1|BJ582585
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTA                         CGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
EST: gi|162258893|gb|FC434900.1|FC434900
EST:     CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTCCCTGGAAGTA                         GGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA
genomic: CTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 75

ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagta ... ttttttgcagCGAATCCGCCACTGCTAGCACTCTCGTCGCTTAAGTGGAGAGAAATTCCAAGATTTGGCATTTGCAATAGATTTTGGATAGAAAATTTTCCGAAGCTGTA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACAAGGACTCTAAGTTCCGATTGATTTTGATCGAGAGCCGTGTCCACAGGCTAGCTCGCTACTACAAGCGCACCAAGAAGCTCCCCCCTACCTGGAAGTAgtaagtagtaacactccactccttctatctgaggaatattgttgaggaatgacatgaataggtgggcttaatttcactctgcagtttcacattattagca

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG