Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|37823768|gb|BJ581834.1|BJ581834EST: AGCGAGAGCGGCAGGACGAGTCCGCTTCGGAGCTCCAGCCGGCTGCTCAG ATCGGGAGTTTCAAGCACTGGAAACGAGGTAATTGAGCTTAAAAATCAAGC
genomic: AGCGAGAGCGGCAGGACGAGTCCGCTTCGGAGCTCCAGCCGGCTGCTCAGgtgcgcatct ... tctcaaacagATCGGGAGTTTCAAGCACTGGAAACGAGGTAATTGAGCTTAAAAATCAAGC
EST:
gi|37825603|gb|BJ583669.1|BJ583669EST: AGCGAGAGCGGCAGGACGAGTCCGCTTCGGAGCTCCAGCCGGCTGCTCAG ATCGGGAGTTTCAAGCACTGGAAACGAGGTAATTGAGCTTAAAAATCAAGC
genomic: AGCGAGAGCGGCAGGACGAGTCCGCTTCGGAGCTCCAGCCGGCTGCTCAGgtgcgcatct ... tctcaaacagATCGGGAGTTTCAAGCACTGGAAACGAGGTAATTGAGCTTAAAAATCAAGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGAATTTTACTGCACCTCGACGGAGGGAGAGCTGCCCGGGATCTACTGTGAGCGAGAGCGGCAGGACGAGTCCGCTTCGGAGCTCCAGCCGGCTGCTCAGgtgcgcatctctagagagcaattccggccactcggggtattatgcacagagtaagccggcacccaagaagcagcctttcagaccagtctaaagctgtcgccaaattgctactgacaagcatgtttgtttctggaaaatctctcaaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT