1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCCAGACCCCGGCAGTGAAGCCTTGGGGGAGATGCTGCAATGTTGTATCTGCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAGgtttgtggttctcgtctgacgttttttgcaacttctgcaatttaattaatttttggtactagtttcattgcataaccctaaccgcctgctgcag
species | Physcomitrella patens |
transcript | PP1S207_67V6.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCGAAGACTGGTTTCATGAGCGCCATCTTGGNCTCCCGCCCAACCTTCAG TTTCAAAGAGACGACGAAGGAAAGCCTACCTTTGAGEST: gi|67718194|gb|BJ968453.1|BJ968453
genomic: GCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAGgtttgtggtt ... cctgctgcagTTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAG
EST: GCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAG TTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAGGAGATCATATGCCAG
genomic: GCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAGgtttgtggtt ... cctgctgcagTTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAGGAGATCATATGCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCAGACCCCGGCAGTGAAGCCTTGGGGGAGATGCTGCAATGTTGTATCTGCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAGgtttgtggttctcgtctgacgttttttgcaacttctgcaatttaattaatttttggtactagtttcattgcataaccctaaccgcctgctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA