1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtttgtggttctcgtctgacgttttttgcaacttctgcaatttaattaatttttggtactagtttcattgcataaccctaaccgcctgctgcagTTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAGGAGATCATATGCCAGGCTTGTGTGCCGCGATGCTCATTCCTGTCAAAATACCCCGAGGTTTTGA
species | Physcomitrella patens |
transcript | PP1S207_67V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCGAAGACTGGTTTCATGAGCGCCATCTTGGNCTCCCGCCCAACCTTCAG TTTCAAAGAGACGACGAAGGAAAGCCTACCTTTGAGEST: gi|67718194|gb|BJ968453.1|BJ968453
genomic: GCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAGgtttgtggtt ... cctgctgcagTTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAG
EST: GCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAG TTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAGGAGATCATATGCCAG
genomic: GCGAAGACTGGTTTCATGAGCGCCATCTTGGCCTCCCGCCCACCCTTCAGgtttgtggtt ... cctgctgcagTTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAGGAGATCATATGCCAG
atttaattaatttttggtactagtttcattgcataaccctaaccgcctgctgcagTTTCCAAGAGACGACGAAGGAGAGCCTACATTTGAGGAGATCATATGCCAGGCTTGTGTGCCGCGATGCTCATTCCTGTCAAAATACCCCGAGGTTTTGA
ccctaac putative branch site (score: 2)
attaatttttggta TA-rich tract