1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatacatcctcatttatctgtctaacactagtacattctttgctaattgcctgtgttatcaagcatgtatttgacaatgctatctgttaatgcaacatctcatgacacattcattgcagtgctatccaaattgacagaactcaatcttttaggttgattgaactaaatcatgtgttccttcataatgtgcaacagATGTATGTCACGCCGCCTGACACTGACATCTACTCCATCCCAAGGGTTCTTGCTCCGATGCCGCAAAAG
species | Oryza sativa |
transcript | LOC_Os11g01890.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCAAGGTGCCTGACCCCGACGACGACGTCTTCGACTTCCGGGAG ATGTATGTCACGCCGCCTGACACTGACATCTACTCCATCCCAAGGGTTCTT
genomic: GCAAGGTGCCTGACCCCGACGACGACGTCTTCGACTTCCGGGAGgtatacatcc ... tgtgcaacagATGTATGTCACGCCGCCTGACACTGACATCTACTCCATCCCAAGGGTTCTT
tcaatcttttaggttgattgaactaaatcatgtgttccttcataatgtgcaacagATGTATGTCACGCCGCCTGACACTGACATCTACTCCATCCCAAGGGTTCTTGCTCCGATGCCGCAAAAG
aactaaa putative branch site (score: 6)
aactaaat TA-rich tract