1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaagagttatgtactacctatgttaccggtccaaaatattgatactattactgttgcagttattattagatccacatgaccatctttgtttcatattaacatgtaccctgttgtttagGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCCATTACTTTCTCCAAACTCAAACTCGAGTATCCCTGCATATCAACCATCT
species | Oryza sativa |
transcript | LOC_Os10g37730.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AAAAGGCCCTAGCAAGTTGACACTGAACTGTAATGG GTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACCCCGTTTCTTGGAGCCEST: gi|29616394|gb|CB621406.1|CB621406
genomic: AAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGGgtaagagtta ... tgttgtttagGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCC
EST: CTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGG GTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCCEST: gi|29616393|gb|CB621405.1|CB621405
genomic: CTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGGgtaagagtta ... tgttgtttagGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCC
EST: CTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGG GTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCCEST: gi|66912678|gb|CX099526.1|CX099526
genomic: CTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGGgtaagagtta ... tgttgtttagGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCC
EST: CTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGG GTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCC
genomic: CTACTTCTGTCAAAAGGCGCTAGCAAGTTGACACTGAACTGTAATGGgtaagagtta ... tgttgtttagGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCC
tattagatccacatgaccatctttgtttcatattaacatgtaccctgttgtttagGTGGCTTCCCATTGATGTTGCTAGGATGTTTGGACGCCGTTTCTTGGAGCCATTACTTTCTCCAAACTCAAACTCGAGTATCCCTGCATATCAACCATCT
tattaac putative branch site (score: 1)
ccctgtt putative PPT
tttgtttcatattaa TA-rich tract