Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58691488|gb|CK080175.1|CK080175EST: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
EST:
gi|87034326|gb|CI188950.1|CI188950EST: CTGCTCCAAGAGCATCTCCGGTGATGGACCTCAACGAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
EST:
gi|86422527|gb|CI060100.1|CI060100EST: AACGAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: AACGAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
EST:
gi|86494499|gb|CI137132.1|CI137132EST: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
EST:
gi|87034020|gb|CI187382.1|CI187382EST: GAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: GAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
EST:
gi|86502352|gb|CI144985.1|CI144985EST: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
EST:
gi|88831990|gb|CI014549.1|CI014549EST: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCG AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
genomic: CTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGgtaatatttg ... ctctttccagAGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCTATCGGAAGCTCTAGCAAAGGCCCATCGGCGCACCGGAGGCTGAATGCTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGgtaatatttggggcgaactcggttaagttccgttatctgaagaaattatcatctgaatgtggttgaatttgctctttccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA