Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86828223|gb|CI276825.1|CI276825EST: ATGTGCTCCGTACATTGAAGACCTAAGTATTGAG GCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
genomic: ATGTGCTCCGTACATTGAAGACCTAAGTATTGAGgtaatattgg ... ctttttgtagGCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
EST:
gi|87006930|gb|CI275238.1|CI275238EST: TATTTTCCTTACTGAGATGTGCTCCGTACATTGAAGACCTAAGTATTGAG GCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
genomic: TATTTTCCTTACTGAGATGTGCTCCGTACATTGAAGACCTAAGTATTGAGgtaatattgg ... ctttttgtagGCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
EST:
gi|86859560|gb|CI278932.1|CI278932EST: TATTTTCCTTACTGAGATGTGCTCCGTACATTGAAGACCTAAGTATTGAG GCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
genomic: TATTTTCCTTACTGAGATGTGCTCCGTACATTGAAGACCTAAGTATTGAGgtaatattgg ... ctttttgtagGCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
EST:
gi|86493815|gb|CI136448.1|CI136448EST: AAGACCTAAGTATTGAG GCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
genomic: AAGACCTAAGTATTGAGgtaatattgg ... ctttttgtagGCTGAAGATATTTCATTTTCGCATAGAGACGATCCTTATGAAATTGAAGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGAGGTACACGTGACCACAAATTTTGGCCAACAACCGAGCACTATGTCACTATTTTCCTTACTGAGATGTGCTCCGTACATTGAAGACCTAAGTATTGAGgtaatattggatactccccttggacttttatgtcacaatttcaacacttttctcagttggtacttttggtctttttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA