Sequence
atgc intronic sequence ATGC exonic sequencegtgagataagctaatttttaagttgataattctgtttaatgatacacgtggtgtctggtttctaattttatgacttctgtaaatctaaatgcagAGTATGGCATGAGCAAAGATATCTCAACCAAGGGTGATGTCTACAGCTTCGGAATCCTTCTCTTAGAAATGGTAACAGGTAGTAGTCCTATTGATGAAAA
Basic information
species | Oryza sativa |
transcript | LOC_Os06g38780.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29628572|gb|CB633583.1|CB633583EST: ATCAACAAGCTTGGCTTGTCTAAAAGGATCTATTGGATATATTCCACCAG AGTATGGCATGAGCAAAGATATCTCAACCAAGGGTGATGTCTACAGCTTCG
genomic: ATCAACAAGCTTGGCTTGTCTAAAAGGATCTATTGGATATATTCCACCAGgtgagataag ... ctaaatgcagAGTATGGCATGAGCAAAGATATCTCAACCAAGGGTGATGTCTACAGCTTCG
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tgatacacgtggtgtctggtttctaattttatgacttctgtaaatctaaatgcagAGTATGGCATGAGCAAAGATATCTCAACCAAGGGTGATGTCTACAGCTTCGGAATCCTTCTCTTAGAAATGGTAACAGGTAGTAGTCCTATTGATGAAAA
tttctaattttatga TA-rich tract