1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...caatttaacacaacctttaaaaaaaacattcgactgaacacacagctactcaaacaaatcgaacaaatctttcaacttaacaaagcaactaaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGGGTGAATCACCGATGCCTCTGAGAAGATCAAACGTTTGACACCTCGACC
species | Oryza sativa |
transcript | LOC_Os06g09230.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACTATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480177|gb|CI122810.1|CI122810
genomic: ACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87016253|gb|CI271664.1|CI271664
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86597973|gb|CI278363.1|CI278363
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480454|gb|CI123087.1|CI123087
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|89164288|gb|CI101376.1|CI101376
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86479199|gb|CI121832.1|CI121832
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86486081|gb|CI128714.1|CI128714
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: TCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86592999|gb|CI270556.1|CI270556
genomic: TCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480184|gb|CI122817.1|CI122817
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86478611|gb|CI121244.1|CI121244
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|89163628|gb|CI100518.1|CI100518
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480293|gb|CI122926.1|CI122926
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87017855|gb|CI273877.1|CI273877
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: CGCTCACAAGCAGCA GAGTTCATGGGCGACTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86478403|gb|CI121036.1|CI121036
genomic: CGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86827391|gb|CI272807.1|CI272807
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87014185|gb|CI273375.1|CI273375
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480359|gb|CI122992.1|CI122992
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87016197|gb|CI271608.1|CI271608
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87027729|gb|CI274293.1|CI274293
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|88254794|gb|CI351422.1|CI351422
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86834222|gb|CI343982.1|CI343982
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86482511|gb|CI125144.1|CI125144
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|109712484|gb|CI105092.1|CI105092
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86482601|gb|CI125234.1|CI125234
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86481889|gb|CI124522.1|CI124522
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86437404|gb|CI119126.1|CI119126
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86832418|gb|CI341684.1|CI341684
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87030995|gb|CI270143.1|CI270143
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86858258|gb|CI271137.1|CI271137
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87037940|gb|CI192562.1|CI192562
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTGCAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGGGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86479759|gb|CI122392.1|CI122392
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86843589|gb|CI339621.1|CI339621
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86477520|gb|CI120153.1|CI120153
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87030208|gb|CI270218.1|CI270218
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87015129|gb|CI273527.1|CI273527
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86868593|gb|CI343165.1|CI343165
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: TCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480114|gb|CI122747.1|CI122747
genomic: TCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480962|gb|CI123595.1|CI123595
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86479366|gb|CI121999.1|CI121999
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87027806|gb|CI274370.1|CI274370
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: CCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|88223564|gb|CI223413.1|CI223413
genomic: CCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|88198425|gb|CI198275.1|CI198275
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAATTCATGGGGGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86478785|gb|CI121418.1|CI121418
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86479694|gb|CI122327.1|CI122327
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87015102|gb|CI273500.1|CI273500
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480540|gb|CI123173.1|CI123173
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86485167|gb|CI127800.1|CI127800
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86481626|gb|CI124259.1|CI124259
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|109712331|gb|CI104939.1|CI104939
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87021439|gb|CI274046.1|CI274046
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86479186|gb|CI121819.1|CI121819
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|89166684|gb|CI103970.1|CI103970
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: TCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86437375|gb|CI119097.1|CI119097
genomic: TCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86478574|gb|CI121207.1|CI121207
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86437553|gb|CI119275.1|CI119275
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86858622|gb|CI273151.1|CI273151
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480181|gb|CI122814.1|CI122814
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86437903|gb|CI119823.1|CI119823
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87014969|gb|CI271568.1|CI271568
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86480942|gb|CI123575.1|CI123575
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|88224346|gb|CI224195.1|CI224195
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86478809|gb|CI121442.1|CI121442
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86855855|gb|CI271074.1|CI271074
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACNEST: gi|87029889|gb|CI274570.1|CI274570
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGAC-
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86478022|gb|CI120655.1|CI120655
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87014767|gb|CI269474.1|CI269474
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|86827113|gb|CI270827.1|CI270827
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGEST: gi|87027422|gb|CI270097.1|CI270097
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
EST: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCA GAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
genomic: GCTTGTACAGCTCGTCCCTCCTCAGCACCCCCTCGCGCTCACAAGCAGCAgtaactggac ... aaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACG
ctactcaaacaaatcgaacaaatctttcaacttaacaaagcaactaaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGGGTGAATCACCGATGCCTCTGAGAAGATCAAACGTTTGACACCTCGACC
aactaaa putative branch site (score: 7)
aactaaattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| caatttaacacaacctttaaaaaaaacattcgactgaacacacagctactcaaacaaatcgaacaaatctttcaacttaacaaagcaactaaatttgcagGAGTTCATGGGCGATTCACAATACCCAAGATCGGTGTTCAGCTCAAGGACGGGTGAATCACCGATGCCTCTGAGAAGATCAAACGTTTGACACCTCGACC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - -acacaac
- - - - - - - - - aaaaaaa
- - - - - - - - - - - - - - - - - -gaacaca
- - - - - - - - - - - - - - - - - - - - - cagctac
- - - - - - - - - - - - - - - - - - - - - - - - - -aaacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -taacaaa