1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...ggtcgagtggttcaaaataaataacaggattatatagtgtttcaaagtttacattatcacttcatgtgtgctgtgtgttaactactacttcatgctgcagCATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAACTGGTGCACAGCATACCACCTCTTGTGAAGGCACACGGAGGTATTCTAGT
species | Oryza sativa |
transcript | LOC_Os02g53210.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CTGTATGGTTTTGTTGCCTTCTTTTCAACATGCAACAGGCATCGGCTTAG CATTTACAAGCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAACEST: gi|33692950|gb|CF321189.1|CF321189
genomic: CTGTATGGTTTTGTTGCCTTCTTTTCAACATGCAACAGGCATCGGCTTAGgtaaccttcc ... catgctgcagCATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAAC
EST: CTGTATGGTTTTGTTGCCTTCTTTTCAACATGCAACAGGCATCGGCTTAG CATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAAC
genomic: CTGTATGGTTTTGTTGCCTTCTTTTCAACATGCAACAGGCATCGGCTTAGgtaaccttcc ... catgctgcagCATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAAC
agtttacattatcacttcatgtgtgctgtgtgttaactactacttcatgctgcagCATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAACTGGTGCACAGCATACCACCTCTTGTGAAGGCACACGGAGGTATTCTAGT
tgttaac putative branch site (score: 2)
ctacttc putative PPT
acattat TA-rich tract