1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...atatatgatcttctctctttttttgtcgattagtgatattatgagatattattcctatatttgtatcacacttttaactaaaatttgtactttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGG
species | Oryza sativa |
transcript | LOC_Os01g72820.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|88371046|gb|CI595158.1|CI595158
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|88311659|gb|CI574876.1|CI574876
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|88371248|gb|CI597725.1|CI597725
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|29676354|gb|CB672629.1|CB672629
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|86904367|gb|CI308577.1|CI308577
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|88359548|gb|CI621079.1|CI621079
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAEST: gi|88825863|gb|CI776428.1|CI776428
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
EST: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGG GATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
genomic: CTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGgtataccatc ... tttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAA
atattattcctatatttgtatcacacttttaactaaaatttgtactttcatacagGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGG
aactaaa putative branch site (score: 2)
tactttc putative PPT
ttttaactaaaatttg TA-rich tract