1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ttgtcatgaaggtgcacgtcaatgagactttatgttttgctttattacattgaaagctgatttcttttcatctcttctgattgtgaacggaccaatttagGTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTGAGAAAGGACAGTGTCCGGTGCTTCTTCCGTTTGTTCGCGGAATGTACTG
species | Oryza sativa |
transcript | LOC_Os01g71590.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCCGCCCTTTTCTAGTTATCAA-AAGTCTGATTTGGATAAGGCTGGTGAG GTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTGEST: gi|33691042|gb|CF319281.1|CF319281
genomic: CCCGCCCTTTTCTAGTTATCAAGAAGTCTGATTTGGATAAGGCTGGTGAGgtatggtagc ... accaatttagGTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTG
EST: CCCGCCCTTTTCTAGTTATCAAGAAGTCTGATTTGGATAAGGCTGGTGAG GTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTGEST: gi|117243634|gb|CT843160.1|CT843160
genomic: CCCGCCCTTTTCTAGTTATCAAGAAGTCTGATTTGGATAAGGCTGGTGAGgtatggtagc ... accaatttagGTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTG
EST: CCCGCCCTTTTCTAGTTATCAAGAAGTCTGATTTGGATAAGGCTGGTGAG GTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTG
genomic: CCCGCCCTTTTCTAGTTATCAAGAAGTCTGATTTGGATAAGGCTGGTGAGgtatggtagc ... accaatttagGTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTG
tacattgaaagctgatttcttttcatctcttctgattgtgaacggaccaatttagGTGGTGCGGGATGCCTTCTTTGATATATCTCCCCGCTTGGACTCCGTCTTGAGAAAGGACAGTGTCCGGTGCTTCTTCCGTTTGTTCGCGGAATGTACTG
ttctgat putative branch site (score: 3)
atttctttt TA-rich tract