Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTCAAGACAAAGGTCTTCCATCCAAACATCAATAGCAATGGAAGCATATGCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatatgaaaacttcactagttttcttttattatgtataacatagtaatgaataacataaacgcctggtaacacatttatcttcttcatgaagtat...

Basic information

species Oryza sativa
transcript LOC_Os01g60410.3
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58593001|gb|CF991309.1|CF991309
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGAACCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88521455|gb|CI449144.1|CI449144
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|163917796|gb|EG712134.1|EG712134
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88836129|gb|CI371234.1|CI371234
EST:     CCTTGACATTCTTAAGGAGCAAT-GAGGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCCCTGCTCACTGACCCCAACCC-GACGACCCT
genomic: CCTTGACATTCTTAAGGAGCAATGGA-GCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88294029|gb|CI510337.1|CI510337
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58690981|gb|CK079668.1|CK079668
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58677585|gb|CK066272.1|CK066272
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCA
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCA
EST: gi|58683175|gb|CK071862.1|CK071862
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88561897|gb|CI492614.1|CI492614
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88511034|gb|CI438540.1|CI438540
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88418612|gb|CI504236.1|CI504236
EST:     TAAGGAGCAATGGGGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGGTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88563994|gb|CI494711.1|CI494711
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTNTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88379383|gb|CI511100.1|CI511100
EST:     GCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88562960|gb|CI493677.1|CI493677
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88242089|gb|CI241938.1|CI241938
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88468717|gb|CI502124.1|CI502124
EST:     TTGACGATTTCTAAG                         GGGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|44665785|gb|CR279219.1|CR279219
EST:     CCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88511626|gb|CI439132.1|CI439132
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88982118|gb|CI027695.1|CI027695
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58592288|gb|CF990596.1|CF990596
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|27047093|gb|CA854301.1|CA854301
EST:     GCCTTGACATTTTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTTGCTCACTGACCCCAACCCGGACGACCC
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGC-TGCTCACTGACCCCAACCCGGACGACCC
EST: gi|86599335|gb|CI355952.1|CI355952
EST:     GCCTGGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88543010|gb|CI470377.1|CI470377
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88323232|gb|CI550911.1|CI550911
EST:     TTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|86525507|gb|CI165713.1|CI165713
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCTACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88981515|gb|CI027133.1|CI027133
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88561003|gb|CI491716.1|CI491716
EST:     CAATGGAGCCCTGCTTTNACAATTTCTAAG                         NTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|163925769|gb|EG714605.1|EG714605
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88545751|gb|CI475333.1|CI475333
EST:     CATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTGTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|33810775|gb|CF331282.1|CF331282
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTTTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88979909|gb|CI026203.1|CI026203
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88506033|gb|CI433539.1|CI433539
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTNTTGCTTTCGATCTGGCTCGCTGCTCACTGACCCCAACCCGGACGACCC
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCT-GCTCGCTGCTCACTGACCCCAACCCGGACGACCC
EST: gi|88391945|gb|CI683764.1|CI683764
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACC
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACC
EST: gi|58594364|gb|CF992672.1|CF992672
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88374000|gb|CI508619.1|CI508619
EST:     AGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: AGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88547326|gb|CI477612.1|CI477612
EST:     CCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTTCTAAG                         GTGTTGCTTTCGATCTGCTCGGTGCTCACTGACCCCAACCCGGACGACCC
genomic: CCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAA-TTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCC
EST: gi|88383387|gb|CI540800.1|CI540800
EST:     ACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: ACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88514033|gb|CI441539.1|CI441539
EST:     TTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|4716037|gb|AU057153.1|AU057153
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88551444|gb|CI481501.1|CI481501
EST:     TTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88303562|gb|CI508168.1|CI508168
EST:     AATGGAGCCCTGCTTGGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: AATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|33692170|gb|CF320409.1|CF320409
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88548025|gb|CI478360.1|CI478360
EST:     TTAAGGAGCAATGGAGCCCTGGTTTGACAATTTCTAA-                         GTNGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCC
genomic: TTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGT-GTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCC
EST: gi|88455857|gb|CI526673.1|CI526673
EST:     CAATTTGTAAGG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCC
genomic: CAATTTCTAA-Ggtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCC
EST: gi|11025980|gb|AU162581.1|AU162581
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58684372|gb|CK073059.1|CK073059
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88514950|gb|CI442604.1|CI442604
EST:     TGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88303125|gb|CI505737.1|CI505737
EST:     TCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58592931|gb|CF991239.1|CF991239
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88508360|gb|CI435866.1|CI435866
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTTTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|33688145|gb|CF316384.1|CF316384
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88544849|gb|CI472374.1|CI472374
EST:     CCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTGTAAG                         GTNTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88511520|gb|CI439026.1|CI439026
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|38470328|gb|CF954459.1|CF954459
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|218501187|gb|FG953295.1|FG953295
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88379814|gb|CI504013.1|CI504013
EST:     CTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88538162|gb|CI467168.1|CI467168
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88287567|gb|CI507457.1|CI507457
EST:     CAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|5038689|gb|AU070799.1|AU070799
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88552442|gb|CI482448.1|CI482448
EST:     ATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: ATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58600178|gb|CK010706.1|CK010706
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|89196925|gb|CI402679.1|CI402679
EST:     CTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58683224|gb|CK071911.1|CK071911
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88461998|gb|CI509464.1|CI509464
EST:     GGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88550753|gb|CI480750.1|CI480750
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88566408|gb|CI497125.1|CI497125
EST:     TGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCCGCTGCTTCACTGACCCCAACCCGGACGACC
genomic: TGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCT-CGCTGC-TCACTGACCCCAACCCGGACGACC
EST: gi|88556200|gb|CI486512.1|CI486512
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88506394|gb|CI433900.1|CI433900
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88532656|gb|CI462154.1|CI462154
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGGTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88486328|gb|CI423599.1|CI423599
EST:     NCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|112785779|gb|EE591396.1|EE591396
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88962910|gb|CI025396.1|CI025396
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|87006558|gb|CI294941.1|CI294941
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGA
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGA
EST: gi|88469083|gb|CI504803.1|CI504803
EST:     ACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: ACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88995567|gb|CI022890.1|CI022890
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88507603|gb|CI435109.1|CI435109
EST:     TGGAGCCCTGCTTTGACAATTTTTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|33688146|gb|CF316385.1|CF316385
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|33810778|gb|CF331283.1|CF331283
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88294019|gb|CI510327.1|CI510327
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|11025613|gb|AU162214.1|AU162214
EST:     CTTGACATTCTTAAGGAGCAATGGGAGCCTTGCTTTGGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCAAACCCGGACGACCCT
genomic: CTTGACATTCTTAAGGAGCAAT-GGAGCCCTGCTTT-GACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|8857681|gb|AU094999.1|AU094999
EST:     GCCTTGACATTCTTAAGGAGCAATGGANCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88569253|gb|CI499970.1|CI499970
EST:     CAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88478794|gb|CI416065.1|CI416065
EST:     CTTAAGGAGCAATGGAGCCCTGGTTTGACAATTTGTAAG                         GTGTTGCTTTCGATCTGCTCCG-TGCTCACTGACCCCAACCCGGACGACCC
genomic: CTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCT-CGCTGCTCACTGACCCCAACCCGGACGACCC
EST: gi|88992335|gb|CI035473.1|CI035473
EST:     GCCTTGACATTCTTAAGGAGCGATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88502612|gb|CI430118.1|CI430118
EST:     TGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88561650|gb|CI492367.1|CI492367
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|396941307|gb|HO188516.1|HO188516
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|58601287|gb|CK011815.1|CK011815
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAANCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88461833|gb|CI506909.1|CI506909
EST:     ACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: ACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88222470|gb|CI222426.1|CI222426
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88541706|gb|CI470992.1|CI470992
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTTTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|3107124|gb|D42862.1|D42862
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGGACCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACG-ACCC
EST: gi|15847912|gb|BI796188.1|BI796188
EST:     GCCTTGACATTCTTAAGGA-CAATGGAGCCCTGCTTTGACCATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88547986|gb|CI478320.1|CI478320
EST:     CTTAAGGAGCAATGGGGCCCTGCTTTGACAATTTCTAAG                         GTGTGGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88488601|gb|CI425872.1|CI425872
EST:     TTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: TTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88544264|gb|CI474347.1|CI474347
EST:     ATGGAGCCCTGCTTTGACCATTTGTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: ATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88286273|gb|CI522573.1|CI522573
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88287417|gb|CI505108.1|CI505108
EST:     CTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: CTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|88281988|gb|CI403384.1|CI403384
EST:     ACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: ACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
EST: gi|86256681|gb|CI061444.1|CI061444
EST:     GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAG                         GTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT
genomic: GCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 73 (upstream exon), 75 (downstream exon)
Score: 398

TTTCAAGACAAAGGTCTTCCATCCAAACATCAATAGCAATGGAAGCATATGCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatat ... catttaccagGTGTTGCTTTCGATCTGCTCGCTGCTCACTGACCCCAACCCGGACGACCCTCTTGTCCCTGAGATTGCCCACATGTACAAGACGGATCGTCCAAAGTATG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTTCAAGACAAAGGTCTTCCATCCAAACATCAATAGCAATGGAAGCATATGCCTTGACATTCTTAAGGAGCAATGGAGCCCTGCTTTGACAATTTCTAAGgtgcttatatgaaaacttcactagttttcttttattatgtataacatagtaatgaataacataaacgcctggtaacacatttatcttcttcatgaagtat

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA