1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtactctgctcgcggcgattttcagccccctcctcccctgcatcgattggtcgaccgatcgaacgacccgactaacctgagatttgaaatttgggtgcaccgcgccgcagCGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCGCGGGGGACTTCGCATGCGGGGCCAACTTCGCGGTGGGCGGCGCCACGGC
species | Oryza sativa |
transcript | LOC_Os01g46080.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCGCGCCACCGGAAGATTCTCCGACGGCCGCCTCGTCGTCGATTTCATCG CGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCGEST: gi|66913979|gb|CX100827.1|CX100827
genomic: CCGCGCCACCGGAAGATTCTCCGACGGCCGCCTCGTCGTCGATTTCATCGgtactctgct ... cgcgccgcagCGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCG
EST: CCGCGCCACCGGAAGATTCTCCGACGGCCGCCTCGTCGTCGATTTCATCG CGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCGEST: gi|29662778|gb|CB659053.1|CB659053
genomic: CCGCGCCACCGGAAGATTCTCCGACGGCCGCCTCGTCGTCGATTTCATCGgtactctgct ... cgcgccgcagCGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCG
EST: CCGCGCCACCGGAAGATTCTCCGACGGCCGCCTCGTCGTCGATTTCATCG CGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCG
genomic: CCGCGCCACCGGAAGATTCTCCGACGGCCGCCTCGTCGTCGATTTCATCGgtactctgct ... cgcgccgcagCGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCG
cgatcgaacgacccgactaacctgagatttgaaatttgggtgcaccgcgccgcagCGGACGCGCTGGGGCTGCCGTTCGTGCGGCCGTACTTGAGCGGGCGGACCGCGGGGGACTTCGCATGCGGGGCCAACTTCGCGGTGGGCGGCGCCACGGC
gactaac putative branch site (score: 1)
atttgaaattt TA-rich tract