Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tttggtgaaatctattttatgctcatacagcacatgtatgcgtaaagtgtgcgtgcacgatttgattgtggggtattgacctggatcgaataatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCCCTCCTCTCACTCAAGGATGGAGCACCAGACTCCTT

Basic information

species Oryza sativa
transcript LOC_Os01g45274.2
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g45274.3 (Oryza sativa), 3'ss of exon 6
lower sequence: GRMZM2G121878_T06 (Zea mays), 3'ss of exon 5
tttggtgaaatctattttatgctcatacagcacatgtatgcgtaaagtgtgcgtgcacgat-ttgattgtggggtattgacctggatcgaataatctgcagGTCGAACTCATCGTGGT--GATTGGCCACAGC---CGCTGCG-GTGGAATCAAGGCCCTCCTCTCACTCAAGGATGGA-GCACCAGACTCCTT-------
 |  ||     | |    |  |  || |  | |||| |   ||    |  ||       || ||  |     |||  |   | |  | |   || |||||| || |   |  ||      | |  ||||  |    ||| | | | |   ||||||  |   ||    |      |||   || | |   |  |       
gtacgtacgtacgagcaaacaccgat-cgacgcatgcaacggtggtatcagccacactaatattactcacacggtcgtcttccgttttggccaaactgcagATCAAGTACGCCGGCACCGGGTCCGCCATCGAGTACGCCGTGTGCGCGCTCAAGGTGCAGGTCATCGTGGTCATTGGCCACAGCTGCTGCGGTGGCATCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|38471649|gb|CF955780.1|CF955780
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38471231|gb|CF955362.1|CF955362
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29686022|gb|CB682297.1|CB682297
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29615755|gb|CB620767.1|CB620767
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58591077|gb|CF989385.1|CF989385
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38476030|gb|CF960163.1|CF960163
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GGCGAACTCATCGTGGTGATTGGCCACAGCCGCTGTGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58590664|gb|CF988972.1|CF988972
EST:     AGCACGCTGGCGTCGGGTCGGGCATCGAGTACGCCGTCTG-GCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGNC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33800771|gb|CF326257.1|CF326257
EST:     GCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: GCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29615754|gb|CB620766.1|CB620766
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481454|gb|CF965543.1|CF965543
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|11442961|gb|BF430857.1|BF430857
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38477597|gb|CF961730.1|CF961730
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|4715141|gb|AU056258.1|AU056258
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481330|gb|CF965419.1|CF965419
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|11442678|gb|BF430581.1|BF430581
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33676856|gb|CF305095.1|CF305095
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38479707|gb|CF963796.1|CF963796
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38475423|gb|CF959556.1|CF959556
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGAGGGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38483318|gb|CF967120.1|CF967120
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAGCTCATCGTGGTGATTTGGCCACAGCCGCTGCGGTGGAATCAAGGC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGA-TTGGCCACAGCCGCTGCGGTGGAATCAAGGC
EST: gi|88214983|gb|CI214832.1|CI214832
EST:     CCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: CCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29682701|gb|CB678976.1|CB678976
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38477472|gb|CF961605.1|CF961605
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAAGTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|84117489|gb|CD151256.1|CD151256
EST:     GTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: GTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58613056|gb|CK040768.1|CK040768
EST:     GCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTGCGGG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGC
genomic: GCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCT-CAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGC
EST: gi|33684627|gb|CF312866.1|CF312866
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|36355243|gb|CF589207.1|CF589207
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38475308|gb|CF959441.1|CF959441
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481100|gb|CF965189.1|CF965189
EST:     CCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGG-CACAGCCGCTGCGGGTGGAATCAAGGC
genomic: CCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGC-GGTGGAATCAAGGC
EST: gi|38468721|gb|CF952852.1|CF952852
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33822852|gb|CF337231.1|CF337231
EST:     GCACGCTGGCGTCNGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: GCACGCTGGCGTC-GGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38480149|gb|CF964238.1|CF964238
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33686819|gb|CF315058.1|CF315058
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|11442940|gb|BF430837.1|BF430837
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29684733|gb|CB681008.1|CB681008
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38479943|gb|CF964032.1|CF964032
EST:     CGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCGAGGCC
genomic: CGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481171|gb|CF965260.1|CF965260
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33692811|gb|CF321050.1|CF321050
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33659185|gb|CF281798.1|CF281798
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29657151|gb|CB653426.1|CB653426
EST:     AGCACGCTGGCGGCGGGGCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38482391|gb|CF966431.1|CF966431
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58594834|gb|CF993142.1|CF993142
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAATGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33665509|gb|CF296476.1|CF296476
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29685826|gb|CB682101.1|CB682101
EST:     AGCACGCTGGCGTCGGGTCGGCCATGGAGTACGCCGTTTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38475457|gb|CF959590.1|CF959590
EST:     CGAGTACG-CGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: CGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|30226892|gb|CB964784.1|CB964784
EST:     AGCACGCTGTCTTCGGGTCGCCCATCGAGTACCCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58611704|gb|CK039416.1|CK039416
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29689634|gb|CB685909.1|CB685909
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29682804|gb|CB679079.1|CB679079
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|8859245|gb|AU096563.1|AU096563
EST:     CACGNTGGCGTCGGNTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: CACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29685979|gb|CB682254.1|CB682254
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|11442622|gb|BF430525.1|BF430525
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33680416|gb|CF308655.1|CF308655
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38475550|gb|CF959683.1|CF959683
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|55411204|gb|CV723580.1|CV723580
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|55434199|gb|CV730218.1|CV730218
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|313079797|gb|HO213236.1|HO213236
EST:     ACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: ACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|4715140|gb|AU056257.1|AU056257
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481828|gb|CF965899.1|CF965899
EST:     CTGGCGTCGGGTCGG-CATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCGAGAGCCGCTGCGGTGGAATCAAGGCC
genomic: CTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|11442977|gb|BF430873.1|BF430873
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38475763|gb|CF959896.1|CF959896
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29684734|gb|CB681009.1|CB681009
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33689373|gb|CF317612.1|CF317612
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCGTCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38476134|gb|CF960267.1|CF960267
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481661|gb|CF965750.1|CF965750
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGACGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38481869|gb|CF965938.1|CF965938
EST:     GCACGCTGGCGTCGGGTCGGCCATCGAGTGACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: GCACGCTGGCGTCGGGTCGGCCATCGAGT-ACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29664042|gb|CB660317.1|CB660317
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58594391|gb|CF992699.1|CF992699
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGC
EST: gi|38473166|gb|CF957298.1|CF957298
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58585665|gb|CF983973.1|CF983973
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|86250978|gb|CI013988.1|CI013988
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|13904802|gb|BF889440.1|BF889440
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|33662734|gb|CF293701.1|CF293701
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38482639|gb|CF966593.1|CF966593
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38476451|gb|CF960584.1|CF960584
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTG
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTG
EST: gi|8956162|gb|BE229966.1|BE229966
EST:     AGCACGCTGGCGTCGGCTCGGCCATCGAGTACTCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|29686023|gb|CB682298.1|CB682298
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|23513401|gb|BU673116.1|BU673116
EST:     GCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTTCGGTGGAATCAAGGCC
genomic: GCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|11442915|gb|BF430814.1|BF430814
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|58589913|gb|CF988221.1|CF988221
EST:     GCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAGGGNC
genomic: GCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38477036|gb|CF961169.1|CF961169
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38468697|gb|CF952828.1|CF952828
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGGCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
EST: gi|38480358|gb|CF964447.1|CF964447
EST:     AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAG                         GTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC
genomic: AGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 54 (upstream exon), 74 (downstream exon)
Score: 248

ATCAAGCACGCTGGCGTCGGGTCGGCCATCGAGTACGCCGTCTGCGCCCTCAAGgtcaactctc ... taatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCCCTCCTCTCACTCAAGGATGGAGCACCAGACTCCTT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agtgtgcgtgcacgatttgattgtggggtattgacctggatcgaataatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCCCTCCTCTCACTCAAGGATGGAGCACCAGACTCCTT
                            tattgac  putative branch site (score: 248)
              atttgatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tttggtgaaatctattttatgctcatacagcacatgtatgcgtaaagtgtgcgtgcacgatttgattgtggggtattgacctggatcgaataatctgcagGTCGAACTCATCGTGGTGATTGGCCACAGCCGCTGCGGTGGAATCAAGGCCCTCCTCTCACTCAAGGATGGAGCACCAGACTCCTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCA
tttggtg
- - - - - - - - ttatgct
- - - - - - - - - - - - -tacagca
- - - - - - - - - - - - - - - - - tgtatgc
- - - - - - - - - - - - - - - - - - - - - - - - -tgcgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgattgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgacctg