1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtattttgcaagacactcgtatttctggtgtactcctttttacacgctaatggataatttactttgcttaccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCAAGTTTCAAAGTCACAGGAGTAG
species | Oryza sativa |
transcript | LOC_Os01g43170.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GAAACTGCATCATCTGCCAAAGCTGCTCTGGATGGTAGATGCATTCCTAG CTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCEST: gi|58678954|gb|CK067641.1|CK067641
genomic: GAAACTGCATCATCTGCCAAAGCTGCTCTGGATGGTAGATGCATTCCTAGgtattttgca ... taccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTC
EST: TGCATTCCTAG CTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTGTTC
genomic: TGCATTCCTAGgtattttgca ... taccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTC
tctggtgtactcctttttacacgctaatggataatttactttgcttaccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCAAGTTTCAAAGTCACAGGAGTAG
tgcttac putative branch site (score: 2)
ctttgctt CT-rich tract
taatggataattta TA-rich tract