1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatgtgcctaagtctcagcactgcttttatgacattttcacctttttattttgttgaaatatttgttgttgatgatgttgcagTCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTT
species | Oryza sativa |
transcript | LOC_Os01g13170.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TCTTCTTTGATA-TCAATTTAGTAACTCTTACCCTGCTAATCCTCCG TCAGTATACTACCACTCTGGCGGACTACGGATT-ACCCAAACTTATACAATEST: gi|29662284|gb|CB658559.1|CB658559
genomic: TCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCAgtatgtgcct ... gatgttgcagTCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAAT
EST: TCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCA TCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAAT
genomic: TCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCAgtatgtgcct ... gatgttgcagTCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAAT
atgacattttcacctttttattttgttgaaatatttgttgttgatgatgttgcagTCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTT
tgttgat putative branch site (score: 31)
tttttattttgttgaa TA-rich tract