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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGCGGTGCACAGCATCCTCGTCCACAAGTCCAACGAGGACAAGATCATGCTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctactatctagggttagggtttcttctctcctactctcttccaatcctctgatcccgttcctttccgttctgttttagggttcag

Basic information

species Glycine max
transcript GLYMA20G38970.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G38970.1 (Glycine max), 5'ss of exon 1
lower sequence: LOC_Os03g48930.1 (Oryza sativa), 5'ss of exon 1
CGGCGGTGCACAGCATCCTCGTCCACAAGTCCAACGAGGACAAGATCATGCTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctactatctagggttagggtttcttctc---tcctactctcttccaatcctctgatcccgttcctttccgttctg--ttttagggttcag-------------------------------------------------------------------------------
|||||||||| |||||||| ||||||||| || ||||||||||| | ||| | |||||   |||||| || || | |||   ||| |||||||| ||| ||||    |   |    |        || ||||    |   |  ||   |  ||| | | |   |||  ||   |||  |  ||  || | || |                                                                               
CGGCGGTGCAGAGCATCCTGGTCCACAAGACCGACGAGGACAAGGTGATGGTGCTCGACAGCCACAAGCTGATGGGCGCGTCCGGAGAGCCCGGCGACCGgtaagaccccgccgccgcccccccctcctctcgatcctcgcgttcgatccgtccgccggttttgttttttagggtttggaattgcagcgatctggtcccccgatctggtttggttatggaaggggatgggtttttggtccttattgcggttggtgtgcttcgtgtgttcgcag

upper sequence: GLYMA20G38970.1 (Glycine max), 5'ss of exon 1
lower sequence: Vv07s0151g00690.t01 (Vitis vinifera), 5'ss of exon 1
CGGCGGTGCACAGCATCCTCGTCCACAAGTCCAACGAGGACAAGATCATGCTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctactatctagggttagggtttcttctctcctactctcttccaatcctctg----atcccgttcctttccgttctgt-tttagggttcag-------
| || || |||||||||||||| ||||| ||||||||||||||||||||| | || ||||| ||||| ||| | | ||| ||||||||   ||| ||||||| | |  | |||  | |  ||| || |||| |     ||      || |    |    ||              || ||  | | | |||| |       
CAGCCGTACACAGCATCCTCGTTCACAAATCCAACGAGGACAAGATCATGGTTCTTGATTCTCACAAGCTCTTGGGCGCCAGCGGCGAAGGCGGCGACAGgtctgttttttctctgatcggggatt-ttctgttgggttcgtgggaaaacaggggggaaatttgagaaaaggagattttgaatcttgtgttccgtgacatt

upper sequence: GLYMA20G38970.1 (Glycine max), 5'ss of exon 1
lower sequence: PP1S44_302V6.1 (Physcomitrella patens), 5'ss of exon 1
CGGCGGTGCACAGCATCCTCGTCCACAAGTCCAACGAGGACAAGATCATGCTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctactatctagggttagggtttcttctctcctactctcttccaatcctctgatcc--cgttcctttccgttctgttttagggttcag-----------
|   |||||| |||||| | || || ||| | |||||||||||||||||| |||||||||||||||| ||  | | ||  |  || |||  ||| ||||||||  ||  ||| |   |  |||   |  ||       |    || |||    || ||    |    ||   ||  ||  |  ||  ||             
CACAGGTGCAGAGCATCGTGGTGCAGAAGACAAACGAGGACAAGATCATGATCCTCGATTCCCACAAGCTGCTCGGCGTCACTGGTGAGAGCGGGGACAGgtaggtatgatccac--tacgggaaccagctgattgggttaggtcgaatttgttgttctattgagaattagggtgttgggtggggcatcgatctctaggatt

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27426852|gb|CA938372.1|CA938372
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|27426852|gb|CA938372.1|CA938372
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|27426852|gb|CA938372.1|CA938372
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9901547|gb|BE610515.1|BE610515
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9901547|gb|BE610515.1|BE610515
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9901547|gb|BE610515.1|BE610515
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298196926|gb|HO041669.1|HO041669
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298196926|gb|HO041669.1|HO041669
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298196926|gb|HO041669.1|HO041669
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|254335231|gb|GR846728.1|GR846728
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|254335231|gb|GR846728.1|GR846728
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|254335231|gb|GR846728.1|GR846728
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9259295|gb|BE347372.1|BE347372
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9259295|gb|BE347372.1|BE347372
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9259295|gb|BE347372.1|BE347372
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|13480010|gb|BG509353.1|BG509353
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|13480010|gb|BG509353.1|BG509353
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|13480010|gb|BG509353.1|BG509353
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298177460|gb|HO023593.1|HO023593
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298177460|gb|HO023593.1|HO023593
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298177460|gb|HO023593.1|HO023593
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|254325949|gb|GR838830.1|GR838830
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|254325949|gb|GR838830.1|GR838830
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|254325949|gb|GR838830.1|GR838830
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|151397676|gb|EV267549.1|EV267549
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|151397676|gb|EV267549.1|EV267549
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|151397676|gb|EV267549.1|EV267549
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|15813614|gb|BI785889.1|BI785889
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|15813614|gb|BI785889.1|BI785889
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|15813614|gb|BI785889.1|BI785889
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9902807|gb|BE611775.1|BE611775
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9902807|gb|BE611775.1|BE611775
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|9902807|gb|BE611775.1|BE611775
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298195591|gb|HO043982.1|HO043982
EST:     CTCCTCGGTTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298195591|gb|HO043982.1|HO043982
EST:     CTCCTCGGTTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298195591|gb|HO043982.1|HO043982
EST:     CTCCTCGGTTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|21285827|gb|BQ473698.1|BQ473698
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|21285827|gb|BQ473698.1|BQ473698
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|21285827|gb|BQ473698.1|BQ473698
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|192300108|gb|FG992231.1|FG992231
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|192300108|gb|FG992231.1|FG992231
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|192300108|gb|FG992231.1|FG992231
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298172982|gb|HO019981.1|HO019981
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298172982|gb|HO019981.1|HO019981
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298172982|gb|HO019981.1|HO019981
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298165711|gb|HO008682.1|HO008682
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298165711|gb|HO008682.1|HO008682
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298165711|gb|HO008682.1|HO008682
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|58019270|gb|CX706012.1|CX706012
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         TTCACAGAGTACATTCAGAAGAACGTCGCCTTGTATCAGTTCCGTAACGGC
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcagTTCACAGAGTACATTCAGAAGAACGTCGCCTTGTATCAGTTCCGTAACGGC
EST: gi|298194947|gb|HO043419.1|HO043419
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298194947|gb|HO043419.1|HO043419
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|298194947|gb|HO043419.1|HO043419
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|4437057|gb|AI522922.1|AI522922
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|4437057|gb|AI522922.1|AI522922
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|4437057|gb|AI522922.1|AI522922
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|192305778|gb|FG995720.1|FG995720
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|192305778|gb|FG995720.1|FG995720
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-
EST: gi|192305778|gb|FG995720.1|FG995720
EST:     CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAG                         G
genomic: CTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctacta ... tagggttcag-

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CGGCGGTGCACAGCATCCTCGTCCACAAGTCCAACGAGGACAAGATCATGCTCCTCGATTCCCACAAACTCATTGCCGCTAGCGGCGAGCCCGGAGACAGgtatctactatctagggttagggtttcttctctcctactctcttccaatcctctgatcccgttcctttccgttctgttttagggttcag

- - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC