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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATCCCGGCAAGCCCGTCATGGAAGTTGGAAGCTCCGACTTCCCAAACCCTCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctacttttttctttccttccttctctctctctctctctctctttttttagggtttcaatctgattcctctgtgcttgttcttgttgtgcag

Basic information

species Glycine max
transcript GLYMA20G38630.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151408856|gb|EV278664.1|EV278664
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCGAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
EST: gi|13481004|gb|BG510347.1|BG510347
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
EST: gi|213598573|gb|DB958157.1|DB958157
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
EST: gi|298169495|gb|HO020855.1|HO020855
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGAATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
EST: gi|213591380|gb|DB959894.1|DB959894
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
EST: gi|192327952|gb|FK021699.1|FK021699
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
EST: gi|298199497|gb|HO042860.1|HO042860
EST:     TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACG                         GCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG
genomic: TCGTTCTGCAATGAACTCTCCCCTCGCCAAATCGCTCTTCGCAATCGACGgtctctactt ... tgttgtgcagGCGTTACTCGCGTTTTCTTTGGATCTGATTTCGTTACCGTTACGAAATCGG