1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TACGGATAATGCGTAGGTTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataactttttccctcttttcattattaaatatttttacaaaataatgataacttcttgttgcccaaattggtctttgcaaccttagctattttccatgttactcttttcatacttaggtgtctcaccagtgttactaatgtaccattttgcag
species | Glycine max |
transcript | GLYMA20G37330.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAG AGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAAEST: gi|9564976|gb|BE474476.1|BE474476
genomic: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataact ... cattttgcagAGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
EST: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAG AGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAAEST: gi|298181852|gb|HO026027.1|HO026027
genomic: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataact ... cattttgcagAGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
EST: GCTGTTACTCGTCCTCCCAATCTGTCAATCATTTCAGAGTATCTACCAAG AGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATTGATGAGAAEST: gi|19054297|gb|BM732964.1|BM732964
genomic: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataact ... cattttgcagAGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
EST: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAG AGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAAEST: gi|33389731|gb|CA852938.1|CA852938
genomic: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataact ... cattttgcagAGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
EST: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAG AGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAAEST: gi|151393400|gb|EV263275.1|EV263275
genomic: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataact ... cattttgcagAGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
EST: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAAAGTATCTACCAAG AGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
genomic: GCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataact ... cattttgcagAGGAAGCTTGTACCGAATTCTTCATCGCTCTAATTATCAGATTGATGAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACGGATAATGCGTAGGTTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGgtatataactttttccctcttttcattattaaatatttttacaaaataatgataacttcttgttgcccaaattggtctttgcaaccttagctattttccatgttactcttttcatacttaggtgtctcaccagtgttactaatgtaccattttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT