1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatattttattttatagatttgtttatatgccccctctggtgtgttggacggttagtcctccaatggaaatattgatgctttctgacatttgtttctatcatag
species | Glycine max |
transcript | GLYMA20G36750.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAG GTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGATEST: gi|10231757|gb|BE800645.1|BE800645
genomic: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatat ... tctatcatagGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGAT
EST: GACGCTCTAGAAGAAGAAAGCAAGCTCATTTAACTGACCTAGAAACACAG GTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGATEST: gi|151404888|gb|EV274702.1|EV274702
genomic: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatat ... tctatcatagGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGAT
EST: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAG GTTTCTCAATTAAGGGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGATEST: gi|57575528|gb|CX548503.1|CX548503
genomic: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatat ... tctatcatagGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGAT
EST: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAG GTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGATEST: gi|22521787|gb|BU080608.1|BU080608
genomic: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatat ... tctatcatagGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGAT
EST: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAG GTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGAT
genomic: GACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatat ... tctatcatagGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGgtgtgtatattttattttatagatttgtttatatgccccctctggtgtgttggacggttagtcctccaatggaaatattgatgctttctgacatttgtttctatcatag
- - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - AAGAAA