1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAAGTGGATCATCAAGAGAACAGTCAGATGATGAGGACATTGAGGGAGAGACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGgtaacattattctcaaaattacctgactttgttgtagaaaatgccagtgattcttgtatactcaggagttaaatatactatcatgtaattgtgttcagag...
species | Glycine max |
transcript | GLYMA20G36750.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAG GATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGCEST: gi|10231757|gb|BE800645.1|BE800645
genomic: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGgtaacattat ... tatatctcagGATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGC
EST: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAG GATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAAGCEST: gi|57575528|gb|CX548503.1|CX548503
genomic: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGgtaacattat ... tatatctcagGATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGC
EST: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAG GATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGCEST: gi|22521787|gb|BU080608.1|BU080608
genomic: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGgtaacattat ... tatatctcagGATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGC
EST: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAG GATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGC
genomic: ACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGgtaacattat ... tatatctcagGATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGTGGATCATCAAGAGAACAGTCAGATGATGAGGACATTGAGGGAGAGACATCTATGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGgtaacattattctcaaaattacctgactttgttgtagaaaatgccagtgattcttgtatactcaggagttaaatatactatcatgtaattgtgttcagag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG