Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|10254228|gb|BE821994.1|BE821994EST: AAGATGCCAAAGAAGGGTCGACCACTTTCCTTGCAG ACCGTAGAGCTGAAAGTAAGGATGTGCTGCACTGGCTGCGAGAGAGTTGTT
genomic: AAGATGCCAAAGAAGGGTCGACCACTTTCCTTGCAGgtttgctttc ... ttcgtttcagACCGTAGAGCTGAAAGTAAGGATGTGCTGCACTGGCTGCGAGAGAGTTGTT
EST:
gi|151402033|gb|EV271846.1|EV271846EST: TTCCTAGGAACTTCAAGATGCCAAAGAAGGGTCGACCACTTTCCTTGCAG ACCGTAGAGCTGAAAGTAAGGATGTGCTGCACTGGCTGCGAGAGAGTTGTT
genomic: TTCCTAGGAACTTCAAGATGCCAAAGAAGGGTCGACCACTTTCCTTGCAGgtttgctttc ... ttcgtttcagACCGTAGAGCTGAAAGTAAGGATGTGCTGCACTGGCTGCGAGAGAGTTGTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCTTCGTTTATATACCGCCTTTTTATCTATCAAAATCATAACAAAGGCATTCCTAGGAACTTCAAGATGCCAAAGAAGGGTCGACCACTTTCCTTGCAGgtttgctttcaatattattattttcattaatcttggaagtggaatagcaccatgtatatatagagggaaagataattaatagtttctccttgatattaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG