Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCCAAGTCAATTTCAAAAGGCTTTCCCTAACCGATATTAAGATTGACATTAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgcttttctatcgattattgttattgttaattttatcattaggttataattgaaaatatttgtttatgttacttgttaatgaacag

Basic information

species Glycine max
transcript GLYMA20G35000.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192314610|gb|FK008468.1|FK008468
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|9987439|gb|BE661547.1|BE661547
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|23053062|gb|BU577553.1|BU577553
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|6719222|gb|AW306869.1|AW306869
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|192295813|gb|FG990865.1|FG990865
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|19268916|gb|BM885172.1|BM885172
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|12689161|gb|BG155497.1|BG155497
EST:     GAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: GAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|151403484|gb|EV273294.1|EV273294
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|8282661|gb|BE020222.1|BE020222
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|15203974|gb|BI426751.1|BI426751
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|298166015|gb|HO008986.1|HO008986
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGGCCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|15664880|gb|BI702251.1|BI702251
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|17401864|gb|BM178646.1|BM178646
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCGTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|31460005|gb|CD402033.1|CD402033
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|213603940|gb|DB960784.1|DB960784
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|4292070|gb|AI441852.1|AI441852
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|213598439|gb|DB958107.1|DB958107
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|24135471|gb|BU925981.1|BU925981
EST:     TAAGATGTTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|20815024|gb|BQ299502.1|BQ299502
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|7147469|gb|AW509391.1|AW509391
EST:     TAAGAAGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|192328608|gb|FK023584.1|FK023584
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|193479679|gb|FK448174.1|FK448174
EST:     TAAGAGAGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|4301072|gb|AI443138.1|AI443138
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|192314611|gb|FK008469.1|FK008469
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|298167865|gb|HO013128.1|HO013128
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|18730104|gb|BM525684.1|BM525684
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|151397456|gb|EV267329.1|EV267329
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|19269342|gb|BM885598.1|BM885598
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|254322905|gb|GR835620.1|GR835620
EST:     TAAAAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|7145961|gb|AW507883.1|AW507883
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAATGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|9439891|gb|BE440403.1|BE440403
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|5057911|gb|AI736387.1|AI736387
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: -AAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|214005155|gb|DB985473.1|DB985473
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTAGACAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|13312789|gb|BG406440.1|BG406440
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|18726738|gb|BM523726.1|BM523726
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|31307637|gb|CD392840.1|CD392840
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|298167836|gb|HO013099.1|HO013099
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|213598764|gb|DB968235.1|DB968235
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|31312051|gb|CD397254.1|CD397254
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|298172301|gb|HO019341.1|HO019341
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|192315797|gb|FK008507.1|FK008507
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|15589725|gb|BI674341.1|BI674341
EST:     GCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: GCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|209719395|gb|BW674475.1|BW674475
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|8286365|gb|BE023924.1|BE023924
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
EST: gi|14258881|gb|BG881789.1|BG881789
EST:     TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTG                         ATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA
genomic: TAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgct ... taatgaacagATGTTAAGACCAAGTGGGAGAAGAGTTCATGGGGCAGGAAACTCATTGTCA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TCCCAAGTCAATTTCAAAAGGCTTTCCCTAACCGATATTAAGATTGACATTAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgttcgttgcttttctatcgattattgttattgttaattttatcattaggttataattgaaaatatttgtttatgttacttgttaatgaacag

- - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG