1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTTTTCCAAACCCCCACTGAAATAATGGAGGTGTTTAAGGTTCTGATTTTCAATAAGGATGCTCCTCAGCCACTGTTCGATGGTGCTACTAAGACTAAGgtttgtgatttcttgttaggttatatttggataaaaattaagaacatgtttttgagcattttaatgcatatttttaaagtttaggaaataaaataaacaa...
species | Glycine max |
transcript | GLYMA20G34670.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TCAATAAGGATGCTCCTCAGCCACTGTTCGATGGTGCTACTAAGACTAAG GTCGATATCACGGTGCTAAAAAAGAAGAACGTGTACTTGTTTATTTCTTCCEST: gi|151402975|gb|EV272788.1|EV272788
genomic: TCAATAAGGATGCTCCTCAGCCACTGTTCGATGGTGCTACTAAGACTAAGgtttgtgatt ... tgtctggtagGTCGATATCACGGTGCTAAAAAAGAAGAACGTGTACTTGTTTATTTCTTCC
EST: GCTCCTCAGCCACTGTTCGATGGTGCTACTAAGACTAAG GTCGATATCACGGTGCTAAAAAAGAAGAACGTGTACTTGTTTATTTCTTCCEST: gi|6134274|gb|AW132667.1|AW132667
genomic: GCTCCTCAGCCACTGTTCGATGGTGCTACTAAGACTAAGgtttgtgatt ... tgtctggtagGTCGATATCACGGTGCTAAAAAAGAAGAACGTGTACTTGTTTATTTCTTCC
EST: GTTCGATGGTGCTACTAAGACTAAG GTCGATATCACGGTGCTAAAAAAGAAGAACGTGTACTTGTTTATTTCTTCC
genomic: GTTCGATGGTGCTACTAAGACTAAGgtttgtgatt ... tgtctggtagGTCGATATCACGGTGCTAAAAAAGAAGAACGTGTACTTGTTTATTTCTTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTTTCCAAACCCCCACTGAAATAATGGAGGTGTTTAAGGTTCTGATTTTCAATAAGGATGCTCCTCAGCCACTGTTCGATGGTGCTACTAAGACTAAGgtttgtgatttcttgttaggttatatttggataaaaattaagaacatgtttttgagcattttaatgcatatttttaaagtttaggaaataaaataaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggataaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaataa