1 5' 3' | 2 5' 3' | 3 5' 3' |
GCCATTGATGATGATTGCAATCAAACTGGGCAGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccattccattccatcatcactatctatcatgttagtgcaatttattcaaataattattatttctcttcattcttctttcctgttttatcaaagg...
species | Glycine max |
transcript | GLYMA20G34520.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGATGATAGCAGGACTCCTCAACTGGCCTTAAGGGACTTTTGCTTCTAAG GTGGTCCTTGACAAAGAGAAACAGGTTGCCACAGTGGACAGAGAGGTTGACEST: gi|17401818|gb|BM178600.1|BM178600
genomic: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccat ... tttccagtagGTGGTCCTTGACAAAGAGAAACAGGTTGCCACAGTGGACAGAGAGGTTGAC
EST: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAG TEST: gi|17401818|gb|BM178600.1|BM178600
genomic: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccat ... tttccagtag-
EST: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAG TEST: gi|17401818|gb|BM178600.1|BM178600
genomic: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccat ... tttccagtag-
EST: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAG TEST: gi|151397075|gb|EV266948.1|EV266948
genomic: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccat ... tttccagtag-
EST: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAG GTGGTCCTTGACAAAGAGAAACAGGTTGCCACAGTGGACAGAGAGGTTGACEST: gi|15814452|gb|BI786727.1|BI786727
genomic: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccat ... tttccagtagGTGGTCCTTGACAAAGAGAAACAGGTTGCCACAGTGGACAGAGAGGTTGAC
EST: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAG GTGGTCCTTGACAAAGAGAAACAGGTTGCCACAGTGGACAGAGAGGTTGAC
genomic: AGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccat ... tttccagtagGTGGTCCTTGACAAAGAGAAACAGGTTGCCACAGTGGACAGAGAGGTTGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCATTGATGATGATTGCAATCAAACTGGGCAGATGATAGCAGGACTCCTCAACTGGCCTCAAGGGACTTTTGCTTCTAAGgttagtccattccattccatcatcactatctatcatgttagtgcaatttattcaaataattattatttctcttcattcttctttcctgttttatcaaagg
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