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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgtgttgcatcttggtgttttgtttctttcgtaactataatgtatgttatatctcacggtgtttgaattttacagGTTGGGGGACTTTTGGGTTTTGGATACTG

Basic information

species Glycine max
transcript GLYMA20G32900.1
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22930245|gb|BU547384.1|BU547384
EST:     GCCATTGATTGTCATATGTTCATTTTTGGTGGTCGCCTTGGGAGTCAAAG                         GTTGGGGGACTTTTGGGTTTTGGATACTG
genomic: GCCATTGATTGTCATATGTTCATTTTTGGTGGTCGCCTTGGGAGTCAAAGgtttgtgttg ... aattttacagGTTGGGGGACTTTTGGGTTTTGGATACTG






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtttctttcgtaactataatgtatgttatatctcacggtgtttgaattttacagGTTGGGGGACTTTTGGGTTTTGGATACTG
           taactataatgtatgt  TA-rich tract