1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGTGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCACATTCTAAGACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAGgtaacataacaaccctttttgtttttgtcttagttaatactacctcgcttgtcctgcacttgaactttatatatatatatatatatatatatatatatat...
species | Glycine max |
transcript | GLYMA20G32480.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACACTCTTCTCTAG GCGTGACAGTTTCATCACTCATAGGGCCTTTTGTGATGCGCTAGCACAAGAEST: gi|208312538|gb|GE111258.1|GE111258
genomic: ACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAGgtaacataac ... ttttatgcagGCGTGACAGTTTCATCACTCATAGGGCCTTTTGTGATGCGCTAGCACAAGA
EST: ACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAG GCGTGACAGTTTCATCACTCATAGGGCCTTTTGTGATGCGCTAGCACAAGAEST: gi|207838323|gb|GD811077.1|GD811077
genomic: ACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAGgtaacataac ... ttttatgcagGCGTGACAGTTTCATCACTCATAGGGCCTTTTGTGATGCGCTAGCACAAGA
EST: ACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAG GCGTGACTAGTTTCATCACTCATAGGGCCTTTTTTGATGCGCTAGCACAAG
genomic: ACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAGgtaacataac ... ttttatgcagGCGTGAC-AGTTTCATCACTCATAGGGCCTTTTGTGATGCGCTAGCACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCACATTCTAAGACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAGgtaacataacaaccctttttgtttttgtcttagttaatactacctcgcttgtcctgcacttgaactttatatatatatatatatatatatatatatatat
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