Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|298171083|gb|HO016115.1|HO016115EST: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAG GATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
genomic: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGgtacctaatt ... ttggatgtagGATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
EST:
gi|209723725|gb|BW665662.1|BW665662EST: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAG GATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
genomic: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGgtacctaatt ... ttggatgtagGATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
EST:
gi|213589050|gb|DB973150.1|DB973150EST: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAG GATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
genomic: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGgtacctaatt ... ttggatgtagGATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
EST:
gi|213594615|gb|DB958006.1|DB958006EST: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAG GATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
genomic: TCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGgtacctaatt ... ttggatgtagGATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACCTCAAAGTTATCACCTTTCAGTGTTAATTTTAAGAAGCCAACCACCTTTCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGgtacctaatttctagttctttttcaaaactttattgcactgctggattatgcatgcttaactttttttcttcttttagttattttctgtttaaggaatct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC