1 5' 3' | 2 5' 3' | 3 5' 3' |
ATTTGGATTTGGTGGGGCTTTCGGTTTTGATGCATTTTCTGAGAAGTGGAACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacattacattcaatctgctgttcaagtcactattaccaagacattttctataagaaaattttcttgtgaaagtttgagttatgaattacacatttg...
species | Glycine max |
transcript | GLYMA20G31850.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAG GATGGTTCAAAGCATGAGGCATGCAATGATTGGCTGCAAAACGGTAACTGCEST: gi|192299721|gb|FG993301.1|FG993301
genomic: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacatta ... tgatgttcagGATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
EST: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAG GATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGCEST: gi|4395813|gb|AI494810.1|AI494810
genomic: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacatta ... tgatgttcagGATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
EST: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAG GATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGCEST: gi|6502469|gb|AW203842.1|AW203842
genomic: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacatta ... tgatgttcagGATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
EST: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAG GATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGCEST: gi|6483214|gb|AW202392.1|AW202392
genomic: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacatta ... tgatgttcagGATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
EST: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAG GATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGCEST: gi|192300503|gb|FG988860.1|FG988860
genomic: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacatta ... tgatgttcagGATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
EST: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAG GATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
genomic: ACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacatta ... tgatgttcagGATGGTTCAAAGCATGAGGCAGGCAATGATTGGCTGCAAAACGGTAACTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTGGATTTGGTGGGGCTTTCGGTTTTGATGCATTTTCTGAGAAGTGGAACAACCAGAAAAGAAAATCCAAATCATCAAAAAATAATCCTTCTTCGCAGgtatacattacattcaatctgctgttcaagtcactattaccaagacattttctataagaaaattttcttgtgaaagtttgagttatgaattacacatttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ataagaaa