Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTAGCCGAAACCGAACCCGGTTCGGCCGAGCCCGAACCGGCCCAAATTTCCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctgaattgtgaattgtgaatagctttttccgatgttgggtgttggattcggtgacccaatgtggaaaagtttcaagctttggtctgaaattgt...

Basic information

species Glycine max
transcript GLYMA20G31530.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10843785|gb|BF067041.1|BF067041
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|4288980|gb|AI441410.1|AI441410
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|15285202|gb|BI469093.1|BI469093
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|10234610|gb|BE803498.1|BE803498
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|4285104|gb|AI440864.1|AI440864
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGNGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|31467392|gb|CD409420.1|CD409420
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|208258738|gb|GE054191.1|GE054191
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTT
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTT
EST: gi|298189942|gb|HO038345.1|HO038345
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|20811757|gb|BQ296235.1|BQ296235
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|298177064|gb|HO023425.1|HO023425
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|17021537|gb|BM092571.1|BM092571
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|298166258|gb|HO009229.1|HO009229
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|213620151|gb|DB965429.1|DB965429
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|6482536|gb|AW201793.1|AW201793
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGNGCGACATCTTACTGGTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|58021654|gb|CX708395.1|CX708395
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|7041680|gb|AW471521.1|AW471521
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|213595229|gb|DB962368.1|DB962368
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|18041202|gb|BM309496.1|BM309496
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|120531050|gb|EH259183.1|EH259183
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|192314356|gb|FK008382.1|FK008382
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|10843966|gb|BF070885.1|BF070885
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCCTTACTGTTCA
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACAT-CTTACTGTTCA
EST: gi|23064631|gb|BU579404.1|BU579404
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|5057700|gb|AI736176.1|AI736176
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|208337779|gb|GE133845.1|GE133845
EST:     AACCT-CCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: AACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|192314357|gb|FK008383.1|FK008383
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|213619453|gb|DB969432.1|DB969432
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGTGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|20811579|gb|BQ296057.1|BQ296057
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|298178424|gb|HO024159.1|HO024159
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|208218324|gb|GE020052.1|GE020052
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGC
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGC
EST: gi|20449003|gb|BQ253127.1|BQ253127
EST:     GGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: GGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|20812116|gb|BQ296594.1|BQ296594
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|209706770|gb|BW678139.1|BW678139
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|17020706|gb|BM091740.1|BM091740
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|15815373|gb|BI787648.1|BI787648
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|4396717|gb|AI495714.1|AI495714
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGNGCGACATCNTTACTGTTCA
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATC-TTACTGTTCA
EST: gi|7925261|gb|AW831287.1|AW831287
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|10710505|gb|BF010223.1|BF010223
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|7796758|gb|AW782152.1|AW782152
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|20207528|gb|BQ133617.1|BQ133617
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|10232709|gb|BE801597.1|BE801597
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|20448527|gb|BQ252651.1|BQ252651
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|208115979|gb|GD909054.1|GD909054
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|298191534|gb|HO039013.1|HO039013
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCGATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|298171203|gb|HO016235.1|HO016235
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|20207519|gb|BQ133608.1|BQ133608
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|7283957|gb|AW596558.1|AW596558
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|11687669|gb|BF595345.1|BF595345
EST:     CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
EST: gi|10233317|gb|BE802205.1|BE802205
EST:     CCCCGGCCCAACCTCCCTCCTGGGGACCCGGTCTCTTCGCTGTCGTAATG                         ATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG
genomic: CCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctg ... tcttgtttagATTGGCGGACGCCAATATATTGTTCACCCGGGGCGACATCTTACTGTTCAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTAGCCGAAACCGAACCCGGTTCGGCCGAGCCCGAACCGGCCCAAATTTCCCCGGCCCAACCTCCCTCCTGGGAACCCGGTCTCTTCGCTGTCGTAATGgtgagtgctgaattgtgaattgtgaatagctttttccgatgttgggtgttggattcggtgacccaatgtggaaaagtttcaagctttggtctgaaattgt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgggtg